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GDE1

SOFT TISSUE - Expression summary

RNA expression
HPA:29.9TPM
GTEx:13.2RPKM
FANTOM5:35.3Tags Per Million

SOFT TISSUE - Annotated protein expression

Pending normal tissue analysis

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

29.9
N/A Female, age 80 Sample 1
TPM: 22.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 38.1
N/A Female, age 57 Sample 3
TPM: 38.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 25.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 24.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

13.2

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 13.6
Samples: 350

Max RPKM: 26.4
Min RPKM: 6.0
Std RPKM: 3.5
Median RPKM: 13.2
GTEX-11EMC-2826-SM-5PNY6 60-69 years, female 26.4
GTEX-ZVT2-2226-SM-5NQ6P 50-59 years, female 24.6
GTEX-ZP4G-2326-SM-57WEM 20-29 years, female 24.4
GTEX-PWN1-0226-SM-5SI7O 40-49 years, female 24.0
GTEX-R55G-2426-SM-2TC5I 40-49 years, female 24.0
GTEX-ZPCL-2126-SM-57WFZ 60-69 years, female 23.9
GTEX-ZDTT-2626-SM-5S2OP 60-69 years, male 21.9
GTEX-11I78-2626-SM-5Q5AI 50-59 years, female 21.7
GTEX-S4P3-1526-SM-3K2AV 50-59 years, female 21.5
GTEX-ZXES-2026-SM-5NQ6R 30-39 years, female 21.4
Show all
Adipose - Visceral (Omentum)
RPKM: 12.6
Samples: 227

Max RPKM: 28.7
Min RPKM: 5.6
Std RPKM: 3.3
Median RPKM: 12.2
GTEX-XAJ8-0226-SM-4GIB2 40-49 years, male 28.7
GTEX-131XG-0126-SM-5K7UJ 50-59 years, female 23.9
GTEX-ZPCL-1026-SM-5GCOX 60-69 years, female 22.6
GTEX-VUSG-1426-SM-3GIJN 50-59 years, male 22.0
GTEX-12WSC-1726-SM-5GCN3 50-59 years, male 20.2
GTEX-146FH-2026-SM-5SI9I 50-59 years, female 20.0
GTEX-ZT9W-1026-SM-57WG5 50-59 years, male 19.3
GTEX-ZYFC-1826-SM-5GZZA 50-59 years, male 19.2
GTEX-11I78-0226-SM-5HL6R 50-59 years, female 19.0
GTEX-1122O-0926-SM-5N9C9 60-69 years, female 18.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

35.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 35.3
FF:10010-101C1 65,65,76 years, mixed 35.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.