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CD79B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:7.7TPM
GTEx:3.0RPKM
FANTOM5:2.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA009178

  

Antibody CAB009751

  

Endothelial cells

 Not detected   Medium  

Glandular cells

 Low   Medium  

Peripheral nerve/ganglion

 Not detected   Medium  
   
   

COLON - HPA RNA-seq

Average TPM

7.7
overview Male, age 54 Sample 1
TPM: 4.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 9.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 7.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 6.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 7.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 22.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 9.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 10.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.0

GTEx sample id

Sample description

RPKM
0.71.11.80.13.40123456789
Colon - Sigmoid
RPKM: 1.5
Samples: 149

Max RPKM: 9.1
Min RPKM: 0.1
Std RPKM: 1.3
Median RPKM: 1.1
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 9.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 7.5
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 6.1
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 5.9
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 5.2
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 4.8
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 4.4
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 4.4
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 3.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 3.7
Show all
1.63.25.20.210.10246810121416182022242628
Colon - Transverse
RPKM: 4.2
Samples: 196

Max RPKM: 28.1
Min RPKM: 0.2
Std RPKM: 3.8
Median RPKM: 3.2
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 28.1
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 17.8
GTEX-11NSD-1626-SM-5986U 20-29 years, male 16.2
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 15.2
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 15.0
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 14.9
GTEX-12C56-0626-SM-5EGGC 20-29 years, male 14.5
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 14.5
GTEX-YEC3-2426-SM-5IFJR 50-59 years, male 14.5
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 13.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

2.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 2.3
FF:10014-101C5 62,83,84 years, mixed 2.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.