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ESOPHAGUS - Expression summary

RNA expression
HPA:19.0TPM
GTEx:9.7RPKM
FANTOM5:31.4Tags Per Million

ESOPHAGUS - Annotated protein expression

Pending normal tissue analysis

ESOPHAGUS - HPA RNA-seq

Average TPM

19.0
overview Female, age 70 Sample 1
TPM: 21.4
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 22.6
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 12.9
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

9.7

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 9.7
Samples: 286

Max RPKM: 25.4
Min RPKM: 2.0
Std RPKM: 3.6
Median RPKM: 9.2
GTEX-YFC4-1226-SM-5LU9R 40-49 years, female 25.4
GTEX-13W46-1926-SM-5J2MF 50-59 years, male 19.0
GTEX-ZZPT-1426-SM-5N9C5 50-59 years, male 18.3
GTEX-OXRK-1326-SM-3NB1A 50-59 years, female 17.8
GTEX-V955-1126-SM-4JBH3 60-69 years, male 17.8
GTEX-Y111-1626-SM-57WCY 50-59 years, male 17.5
GTEX-P78B-1026-SM-3NMC4 40-49 years, female 17.4
GTEX-RNOR-1226-SM-48FDQ 50-59 years, female 17.3
GTEX-RU72-0726-SM-46MUW 50-59 years, female 17.2
GTEX-ZAB4-1126-SM-5HL86 40-49 years, male 17.1
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

31.4

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 31.4
FF:10015-101C6 68,74,75 years, mixed 31.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.