Tissue expression of BRCA1 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	5.6	TPM
GTEx:	1.1	RPKM
FANTOM5:	13.9	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Medium

Antibody staining	Antibody HPA034966	Antibody CAB001946
Glandular cells	Medium	Medium

SMALL INTESTINE - HPA RNA-seq

Average TPM	5.6

Male, age 65

Sample 1
TPM: 4.1

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 5.5

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 5.6

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 7.2

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	1.1

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 1.1

Samples: 88

Max RPKM: 3.8
Min RPKM: 0.2
Std RPKM: 0.5
Median RPKM: 1.0

GTEX-133LE-1426-SM-5IFH1

20-29 years, female

3.8

GTEX-Y5LM-1626-SM-4VDTB

40-49 years, female

2.7

GTEX-WFG8-1626-SM-4LVMB

20-29 years, male

2.6

GTEX-XGQ4-1326-SM-4GIDU

50-59 years, male

2.6

GTEX-ZP4G-1626-SM-57WGD

20-29 years, female

2.3

GTEX-UPK5-2026-SM-4JBIM

40-49 years, male

1.8

GTEX-11P82-0826-SM-5P9GU

20-29 years, male

1.7

GTEX-139YR-2226-SM-5IFFW

50-59 years, male

1.7

GTEX-1399R-2026-SM-5K7WN

30-39 years, male

1.6

GTEX-11NSD-1726-SM-5N9C3

20-29 years, male

1.5

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	13.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 13.9

FF:10024-101D6

15,40,85 years, mixed

13.9