We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
GLT8D1
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:26.5TPM
GTEx:10.0RPKM
FANTOM5:30.2Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA010588

 

Glandular cells

Medium  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

26.5

overview Male, age 65 Sample 1
TPM: 22.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 30.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 28.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 24.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

10.0

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 10.0
Samples: 88

Max RPKM: 16.5
Min RPKM: 5.0
Std RPKM: 2.2
Median RPKM: 9.8
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 16.5
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 15.1
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 14.9
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 13.9
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 13.9
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 13.7
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 13.7
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 13.6
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 13.1
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 12.9
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 12.6
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 12.5
GTEX-1192X-2526-SM-59868 50-59 years, male 12.4
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 12.3
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 11.8
GTEX-13113-1226-SM-5EGHT 60-69 years, female 11.8
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 11.8
GTEX-ZYWO-1526-SM-5SIAL 40-49 years, female 11.7
GTEX-13111-1426-SM-5DUW3 50-59 years, male 11.5
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 11.4
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 11.4
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 11.3
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 11.3
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 11.3
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 11.3
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 11.3
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 11.2
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 11.1
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 10.9
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 10.7
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 10.7
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 10.7
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 10.6
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 10.5
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 10.5
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 10.4
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 10.4
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 10.3
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 10.2
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 10.1
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 10.1
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 10.0
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 10.0
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 9.9
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 9.8
GTEX-13O61-1326-SM-5KM31 60-69 years, male 9.8
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 9.7
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 9.7
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 9.6
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 9.5
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 9.5
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 9.5
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 9.4
GTEX-117YX-0326-SM-5GICL 50-59 years, male 9.4
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 9.4
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 9.2
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 9.1
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 9.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 9.0
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 9.0
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 9.0
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 8.7
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 8.7
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 8.6
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 8.6
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 8.2
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 8.2
GTEX-1122O-1326-SM-5H11F 60-69 years, female 8.1
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 8.1
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 8.0
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 8.0
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 8.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 7.9
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 7.9
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 7.8
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 7.7
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 7.5
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 7.5
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 7.4
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 7.3
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 7.2
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 7.1
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 6.7
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 6.2
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 6.2
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 6.0
GTEX-ZTSS-0926-SM-59865 40-49 years, male 6.0
GTEX-111YS-1426-SM-5GID8 60-69 years, male 5.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

30.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 30.2
FF:10024-101D6 15,40,85 years, mixed 30.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.