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ATP2C1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:36.7TPM
GTEx:10.0RPKM
FANTOM5:39.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA035116

  

Antibody CAB010207

  

Endothelial cells

 Medium   Medium  

Glandular cells

 High   Medium  

Peripheral nerve/ganglion

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

36.7
overview Male, age 54 Sample 1
TPM: 46.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 56.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 47.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 25.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 43.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 28.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 34.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 32
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 35.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 33.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 40.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 32.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 21.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.4
Samples: 149

Max RPKM: 24.3
Min RPKM: 5.2
Std RPKM: 2.0
Median RPKM: 9.2
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 24.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 19.3
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 13.1
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 12.5
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 12.3
GTEX-145LS-2926-SM-5O99G 60-69 years, female 12.3
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 12.2
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 12.2
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 12.0
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 12.0
Show all
Colon - Transverse
RPKM: 10.5
Samples: 196

Max RPKM: 18.7
Min RPKM: 6.2
Std RPKM: 1.8
Median RPKM: 10.3
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 18.7
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 16.5
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 15.8
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 15.7
GTEX-139YR-2126-SM-5KM11 50-59 years, male 15.1
GTEX-144GN-1126-SM-5LU33 50-59 years, male 14.8
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 14.5
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 14.0
GTEX-P4PP-1426-SM-3NM9L 30-39 years, female 13.6
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 13.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

39.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 39.3
FF:10014-101C5 62,83,84 years, mixed 39.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.