Fields »
ABOUT
HELP
BLOG
NDUFS1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:57.7TPM
GTEx:9.3RPKM
FANTOM5:121.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody CAB070844

  

Glandular cells

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

57.7
overview Male, age 54 Sample 1
TPM: 45.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 49.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 61.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 61.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 28.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 59
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 76.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 65.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 50.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 78
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 77.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 58.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 38.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 7.7
Samples: 149

Max RPKM: 14.5
Min RPKM: 3.2
Std RPKM: 1.9
Median RPKM: 7.7
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 14.5
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 11.9
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 11.9
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 11.8
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 11.6
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 11.5
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 11.4
GTEX-13111-1926-SM-5GCOL 50-59 years, male 11.3
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 11.0
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 11.0
Show all
Colon - Transverse
RPKM: 10.6
Samples: 196

Max RPKM: 17.4
Min RPKM: 1.4
Std RPKM: 3.0
Median RPKM: 10.7
GTEX-ZPIC-2226-SM-57WDX 40-49 years, female 17.4
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 17.3
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 17.0
GTEX-PWN1-1426-SM-48TDF 40-49 years, female 16.7
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 16.5
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 16.3
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 16.0
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 15.8
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 15.6
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 15.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

121.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 121.8
FF:10014-101C5 62,83,84 years, mixed 121.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.