Fields »
ABOUT
HELP
BLOG
ERP44

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:22.1TPM
GTEx:11.4RPKM
FANTOM5:63.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
 

Antibody staining

Antibody HPA001318

  

Endothelial cells

 Medium  

Glandular cells

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

22.1
overview Male, age 54 Sample 1
TPM: 25.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 18.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 14.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 22.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 16.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 23.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 22.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 22.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 22.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 28.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 31
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 22.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 18.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

11.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.2
Samples: 149

Max RPKM: 15.8
Min RPKM: 5.1
Std RPKM: 1.4
Median RPKM: 9.0
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 15.8
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 13.7
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 13.2
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 12.5
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 11.8
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 11.8
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 11.6
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 11.6
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 11.5
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 11.3
Show all
Colon - Transverse
RPKM: 13.1
Samples: 196

Max RPKM: 29.3
Min RPKM: 5.8
Std RPKM: 3.5
Median RPKM: 12.7
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 29.3
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 24.3
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 23.0
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 22.2
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 21.6
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 20.6
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 20.1
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 19.1
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 18.9
GTEX-QV31-0826-SM-4R1KR 30-39 years, male 18.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

63.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 63.8
FF:10014-101C5 62,83,84 years, mixed 63.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.