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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:17.3TPM
GTEx:11.1RPKM
FANTOM5:21.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Not available
 
 

Antibody staining

Antibody HPA019477

  

Antibody HPA024018

  

Adipocytes

 High   Not detected  

Fibroblasts

 Medium   Low  

Peripheral nerve

 Medium  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA019477

  

Antibody HPA024018

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Low  

Peripheral nerve

 Medium   Medium  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

17.3
N/A Female, age 80 Sample 1
TPM: 15.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 19
N/A Female, age 57 Sample 3
TPM: 15.9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 19.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 16.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

11.1

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 11.9
Samples: 350

Max RPKM: 19.8
Min RPKM: 5.9
Std RPKM: 2.5
Median RPKM: 11.9
GTEX-QDT8-0226-SM-32PL4 30-39 years, female 19.8
GTEX-SSA3-0226-SM-32QPN 60-69 years, male 19.8
GTEX-S7SE-0226-SM-2XCD4 50-59 years, male 19.6
GTEX-13FHP-0226-SM-5K7WD 50-59 years, male 19.2
GTEX-13N2G-2726-SM-5J1MG 60-69 years, male 18.6
GTEX-Z93T-0226-SM-5HL5Z 50-59 years, male 18.5
GTEX-139TU-0226-SM-5J1NM 60-69 years, male 18.4
GTEX-11P81-2426-SM-5GU65 30-39 years, female 18.0
GTEX-ZUA1-0226-SM-5NQ9Q 40-49 years, male 18.0
GTEX-OIZI-0226-SM-2XCEE 40-49 years, male 17.9
Show all
Adipose - Visceral (Omentum)
RPKM: 9.9
Samples: 227

Max RPKM: 18.4
Min RPKM: 4.3
Std RPKM: 3.0
Median RPKM: 9.7
GTEX-13PL6-0926-SM-5KLYY 40-49 years, female 18.4
GTEX-WYVS-0626-SM-4SOJY 40-49 years, female 17.3
GTEX-13N11-1826-SM-5IJDS 50-59 years, female 16.3
GTEX-11NV4-1426-SM-5BC4W 60-69 years, male 16.0
GTEX-ZAB5-1126-SM-5Q5AD 50-59 years, male 15.5
GTEX-11ZTS-1326-SM-5EQMA 60-69 years, female 15.4
GTEX-11DXY-0326-SM-5H12F 60-69 years, male 15.2
GTEX-13NZ9-2026-SM-5KM1U 50-59 years, male 15.2
GTEX-14A6H-1026-SM-5SIAZ 30-39 years, male 15.0
GTEX-XQ8I-1426-SM-4BOPW 50-59 years, male 15.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

21.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 21.4
FF:10010-101C1 65,65,76 years, mixed 21.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.