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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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GUCA1A
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

GUCA1A

Gene description

Guanylate cyclase activator 1A (retina)

Protein class

Disease related genes
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

5
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Tissue enriched (testis cancer)
HPA (cell line):Group enriched (NTERA-2, SH-SY5Y)
HPA (normal tissue):Tissue enriched (testis)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in retina, mainly in photoreceptor layer.

ANTIBODY IHC RELIABILITY

Data reliability
description

External characterization data supports antibody staining but no internal RNA data available for correlation.

Reliability score

Supported based on 1 antibody.
HPA005561
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PROGNOSTIC SUMMARY

Gene product is not prognostic.
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Tissue enriched (testis cancer)

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA005561

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

All cancer tissues were negative.

GENE INFORMATION

Gene name

GUCA1A (HGNC Symbol)

Synonyms

C6orf131, COD3, CORD14, dJ139D8.6, GCAP, GCAP1, GUCA, GUCA1

Description

Guanylate cyclase activator 1A (retina) (HGNC Symbol)

Entrez gene summary

This gene plays a role in the recovery of retinal photoreceptors from photobleaching. In the recovery phase, the phototransduction messeneger cGMP is replenished by retinal guanylyl cyclase-1 (GC1). GC1 is activated by decreasing Ca(2+) concentrations following photobleaching. The protein encoded by this gene, guanylyl cyclase activating protein 1 (GCAP1), mediates the sensitivity of GC1 to Ca(2+) concentrations. GCAP1 promotes activity of GC1 at low Ca(2+) concentrations and inhibits GC1 activity at high Ca(2+) concentrations. Mutations in this gene cause autosomal dominant cone dystrophy (COD3); a disease characterized by reduced visual acuity associated with progressive loss of color vision. Mutations in this gene prohibit the inactivation of RetGC1 at high Ca(2+) concentrations; causing the constitutive activation of RetGC1 and, presumably, increased cell death. This gene is expressed in retina and spermatagonia. [provided by RefSeq, Feb 2009]

Chromosome

6

Cytoband

p21.1

Chromosome location (bp)

42155406 - 42180056

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000048545 (version 83.38)

Entrez gene

2978

UniProt

P43080 (UniProt - Evidence at protein level)

neXtProt

NX_P43080

Antibodypedia

GUCA1A antibodies

PROTEIN BROWSER

GUCA1A-001
GUCA1A-002
GUCA1A-003
GUCA1A-004
GUCA1A-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

GUCA1A-001
ENSP00000362049
ENST00000372958
P43080 [Direct mapping]
Guanylyl cyclase-activating protein 1
Show all
Predicted intracellular proteins
Disease related genes
Show all
GO:0005509 [calcium ion binding]
GO:0005886 [plasma membrane]
GO:0007165 [signal transduction]
GO:0007603 [phototransduction, visible light]
GO:0016056 [rhodopsin mediated signaling pathway]
GO:0022400 [regulation of rhodopsin mediated signaling pathway]
GO:0097381 [photoreceptor disc membrane]
Show all
201 aa
22.9 kDa
No 0
GUCA1A-002
ENSP00000377784
ENST00000394237
P43080 [Direct mapping]
Guanylyl cyclase-activating protein 1
Show all
Predicted intracellular proteins
Disease related genes
Show all
GO:0001750 [photoreceptor outer segment]
GO:0001917 [photoreceptor inner segment]
GO:0005509 [calcium ion binding]
GO:0005886 [plasma membrane]
GO:0007165 [signal transduction]
GO:0007601 [visual perception]
GO:0007602 [phototransduction]
GO:0007603 [phototransduction, visible light]
GO:0008048 [calcium sensitive guanylate cyclase activator activity]
GO:0016020 [membrane]
GO:0016056 [rhodopsin mediated signaling pathway]
GO:0022400 [regulation of rhodopsin mediated signaling pathway]
GO:0030249 [guanylate cyclase regulator activity]
GO:0030828 [positive regulation of cGMP biosynthetic process]
GO:0031282 [regulation of guanylate cyclase activity]
GO:0031284 [positive regulation of guanylate cyclase activity]
GO:0097381 [photoreceptor disc membrane]
Show all
201 aa
22.9 kDa
No 0
GUCA1A-003
ENSP00000053469
ENST00000053469
P43080 [Direct mapping]
Guanylyl cyclase-activating protein 1
Show all
Predicted intracellular proteins
Disease related genes
Protein evidence (Kim et al 2014)
Show all
GO:0005509 [calcium ion binding]
GO:0005886 [plasma membrane]
GO:0007165 [signal transduction]
GO:0007603 [phototransduction, visible light]
GO:0016056 [rhodopsin mediated signaling pathway]
GO:0022400 [regulation of rhodopsin mediated signaling pathway]
GO:0097381 [photoreceptor disc membrane]
Show all
201 aa
22.9 kDa
No 0
GUCA1A-004
ENSP00000388438
ENST00000418175
A6PVH5 [Direct mapping]
Guanylyl cyclase-activating protein 1
Show all
Predicted intracellular proteins
Show all
GO:0005509 [calcium ion binding]
Show all
88 aa
10.2 kDa
No 0
GUCA1A-201
ENSP00000437476
ENST00000541991
A0A0A0MTF5 [Direct mapping]
Guanylyl cyclase-activating protein 1
Show all
Predicted intracellular proteins
Show all
GO:0005509 [calcium ion binding]
Show all
205 aa
23.5 kDa
No 0

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