Tissue expression of HERPUD1 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	82.7	TPM
GTEx:	54.2	RPKM
FANTOM5:	118.8	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Chondrocytes:	Not available
Fibroblasts:	Medium
Peripheral nerve:	Medium

Antibody staining	Antibody HPA040754	Antibody HPA041219	Antibody CAB037041	Antibody CAB037104
Adipocytes	Medium	Medium	Medium	Medium
Chondrocytes	Medium	Medium
Fibroblasts	Medium	Medium	Medium	Medium
Peripheral nerve	Medium	Low	Medium	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Chondrocytes:	Not available
Fibroblasts:	Medium

Antibody staining	Antibody HPA040754	Antibody HPA041219	Antibody CAB037041	Antibody CAB037104
Adipocytes	Not detected	Low	Medium	Low
Chondrocytes	Medium	Not detected
Fibroblasts	Medium	Low	Medium	Medium

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	82.7

Female, age 80

Sample 1
TPM: 55.4

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 61.5

Female, age 57

Sample 3
TPM: 59.8

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 127

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 110

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	54.2

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 52.2

Samples: 350

Max RPKM: 228.6
Min RPKM: 27.6
Std RPKM: 16.1
Median RPKM: 49.5

GTEX-POYW-0726-SM-2XCEO

60-69 years, male

228.6

GTEX-XYKS-2726-SM-4E3IC

60-69 years, female

165.6

GTEX-13YAN-0426-SM-5O9DR

60-69 years, male

110.0

GTEX-XK95-0426-SM-4AT4R

40-49 years, male

105.5

GTEX-139TU-0226-SM-5J1NM

60-69 years, male

104.7

GTEX-139D8-0326-SM-5IJCJ

30-39 years, female

94.6

GTEX-ZYVF-0226-SM-5GIEG

50-59 years, female

94.6

GTEX-13NZ9-0526-SM-5J1OX

50-59 years, male

89.7

GTEX-X88G-0226-SM-4GIE4

30-39 years, male

86.9

GTEX-XMD2-0226-SM-4WWEE

60-69 years, female

85.3

Show all

Adipose - Visceral (Omentum)
RPKM: 57.4

Samples: 227

Max RPKM: 148.3
Min RPKM: 18.9
Std RPKM: 21.7
Median RPKM: 53.2

GTEX-XYKS-1826-SM-4E3JV

60-69 years, female

148.3

GTEX-132AR-0526-SM-5J2MJ

50-59 years, female

146.9

GTEX-147JS-1026-SM-5S2MP

60-69 years, male

140.3

GTEX-1117F-1326-SM-5EGHH

60-69 years, female

135.0

GTEX-ZAJG-1626-SM-5HL7I

50-59 years, female

129.7

GTEX-ZF28-1426-SM-5S2OG

60-69 years, male

121.5

GTEX-1339X-0726-SM-5L3FF

40-49 years, male

112.2

GTEX-XV7Q-1726-SM-4BRUU

40-49 years, female

111.7

GTEX-13IVO-2426-SM-5K7V9

70-79 years, male

110.5

GTEX-12WSI-1526-SM-5GCNM

50-59 years, male

109.7

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	118.8

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 118.8

FF:10010-101C1

65,65,76 years, mixed

118.8