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HERPUD1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:149.2TPM
GTEx:52.3RPKM
FANTOM5:140.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA040754

  

Antibody HPA041219

  

Antibody CAB037041

  

Antibody CAB037104

  

Endothelial cells

 Medium   Medium   Medium   Not detected  

Glandular cells

 Medium   Medium   High   Medium  

Peripheral nerve/ganglion

 Not detected   Medium   Low  
       
       
       

COLON - HPA RNA-seq

Average TPM

149.2
overview Male, age 54 Sample 1
TPM: 133
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 154.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 160.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 74.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 147.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 137.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 138.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 145
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 221.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 213.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 152.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 115.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 144.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

52.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 36.0
Samples: 149

Max RPKM: 207.0
Min RPKM: 20.6
Std RPKM: 19.2
Median RPKM: 32.6
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 207.0
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 139.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 85.2
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 81.2
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 65.8
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 64.4
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 60.3
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 58.7
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 56.7
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 51.4
Show all
Colon - Transverse
RPKM: 64.7
Samples: 196

Max RPKM: 319.9
Min RPKM: 22.1
Std RPKM: 34.7
Median RPKM: 57.2
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 319.9
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 185.2
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 177.3
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 151.1
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 150.1
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 144.2
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 139.3
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 133.1
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 128.8
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 124.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

140.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 140.2
FF:10014-101C5 62,83,84 years, mixed 140.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.