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ALDH18A1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:52.5TPM
GTEx:19.1RPKM
FANTOM5:41.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA008333

  

Antibody HPA012604

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 High   Medium  

Peripheral nerve/ganglion

 Not detected   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

52.5
overview Male, age 54 Sample 1
TPM: 52.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 40.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 32.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 93.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 28.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 39.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 71.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 57.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 33.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 64.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 58.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 63.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 47
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

19.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 8.1
Samples: 149

Max RPKM: 18.6
Min RPKM: 4.6
Std RPKM: 2.0
Median RPKM: 7.5
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 18.6
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 14.3
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 13.9
GTEX-XXEK-1826-SM-4BRVC 50-59 years, male 13.2
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 12.9
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 12.8
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 12.2
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 12.1
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 12.0
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 11.6
Show all
Colon - Transverse
RPKM: 27.4
Samples: 196

Max RPKM: 80.3
Min RPKM: 3.7
Std RPKM: 16.1
Median RPKM: 29.6
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 80.3
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 66.8
GTEX-R55G-1226-SM-48FDC 40-49 years, female 64.8
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 61.7
GTEX-Q734-1126-SM-48TZY 40-49 years, female 61.1
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 60.4
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 57.8
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 57.7
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 56.7
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 56.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

41.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 41.0
FF:10014-101C5 62,83,84 years, mixed 41.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.