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TARBP1

COLON - Expression summary

RNA expression
HPA:6.3TPM
GTEx:6.0RPKM
FANTOM5:8.6Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA024632

  

Antibody CAB020810

  

Endothelial cells

 Medium   Low  

Glandular cells

 Medium   High  
   
   
   

COLON - HPA RNA-seq

Average TPM

6.3
overview Male, age 54 Sample 1
TPM: 7.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 6.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 5.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 9.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 5.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 7.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

6.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.7
Samples: 149

Max RPKM: 12.0
Min RPKM: 1.2
Std RPKM: 2.3
Median RPKM: 4.0
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 12.0
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 11.7
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 11.2
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 9.9
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 9.7
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 9.6
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 9.5
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 9.4
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 9.3
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 9.1
Show all
Colon - Transverse
RPKM: 6.9
Samples: 196

Max RPKM: 16.0
Min RPKM: 1.1
Std RPKM: 3.0
Median RPKM: 6.6
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 16.0
GTEX-PWN1-1426-SM-48TDF 40-49 years, female 15.6
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 14.9
GTEX-Y9LG-1526-SM-4WWDR 30-39 years, male 14.9
GTEX-13111-0726-SM-5DUVE 50-59 years, male 14.8
GTEX-12C56-0626-SM-5EGGC 20-29 years, male 14.4
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 13.3
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 13.0
GTEX-13QBU-1826-SM-5IJG3 40-49 years, female 12.9
GTEX-139T6-1326-SM-5IFFO 50-59 years, male 12.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

8.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 8.6
FF:10014-101C5 62,83,84 years, mixed 8.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.