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CDK17

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:10.9TPM
GTEx:8.5RPKM
FANTOM5:54.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA015325

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 High  
 
 
 

COLON - HPA RNA-seq

Average TPM

10.9
overview Male, age 54 Sample 1
TPM: 11.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 9.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 10
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 10.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 7.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 11.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 13.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 12.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 13.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 10.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 10.9
Samples: 149

Max RPKM: 27.6
Min RPKM: 4.9
Std RPKM: 4.1
Median RPKM: 9.9
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 27.6
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 27.6
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 24.7
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 23.0
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 22.4
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 21.8
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 21.5
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 19.9
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 19.4
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 18.6
Show all
Colon - Transverse
RPKM: 6.6
Samples: 196

Max RPKM: 23.4
Min RPKM: 2.3
Std RPKM: 3.6
Median RPKM: 5.3
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 23.4
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 20.2
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 18.6
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 17.7
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 17.1
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 16.5
GTEX-Y114-1526-SM-4TT79 50-59 years, female 15.2
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 14.3
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 14.2
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 12.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

54.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 54.1
FF:10014-101C5 62,83,84 years, mixed 54.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.