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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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GUCY1B3
  • TISSUE

  • CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

GUCY1B3

Gene description

Guanylate cyclase 1, soluble, beta 3

Protein class

Enzymes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

7
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Cell line enhanced (HEL, MOLT-4, RPTEC TERT1)
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in most tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Approved based on 2 antibodies.
HPA020870 , CAB010890
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PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (unfavourable) and testis cancer (unfavourable).
Renal cancer p<0.001
Testis cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Renal cancer

STAINING SUMMARY

HPA020870
CAB010890

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cancer tissues showed weak to moderate cytoplasmic staining. A few cases of ovarian cancers were strongly positive. Lymphomas, lung, skin, urothelial and gastric cancers were mainly negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Weak to moderate cytoplasmic staining in most cancer cells. Virtually no staining in lymphomas and squamous cell carcinomas.

GENE INFORMATION

Gene name

GUCY1B3 (HGNC Symbol)

Synonyms

GC-S-beta-1, GC-SB3, GUC1B3

Description

Guanylate cyclase 1, soluble, beta 3 (HGNC Symbol)

Entrez gene summary

This gene encodes the beta subunit of the soluble guanylate cyclase (sGC), which catalyzes the conversion of GTP (guanosine triphosphate) to cGMP (cyclic guanosine monophosphate). The encoded protein contains an HNOX domain, which serves as a receptor for ligands such as nitric oxide, oxygen and nitrovasodilator drugs. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2014]

Chromosome

4

Cytoband

q32.1

Chromosome location (bp)

155758992 - 155807591

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000061918 (version 83.38)

Entrez gene

2983

UniProt

Q02153 (UniProt - Evidence at protein level)

neXtProt

NX_Q02153

Antibodypedia

GUCY1B3 antibodies

PROTEIN BROWSER

GUCY1B3-001
GUCY1B3-003
GUCY1B3-004
GUCY1B3-005
GUCY1B3-007
GUCY1B3-008
GUCY1B3-010

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

GUCY1B3-001
ENSP00000427226
ENST00000505154
B7Z685 [Direct mapping]
Guanylate cyclase 1, soluble, beta 3, isoform CRA_c; Guanylate cyclase soluble subunit beta-1; cDNA FLJ50853, highly similar to Guanylate cyclase soluble subunit beta-1 (EC 4.6.1.2)
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004383 [guanylate cyclase activity]
GO:0005622 [intracellular]
GO:0006182 [cGMP biosynthetic process]
GO:0009190 [cyclic nucleotide biosynthetic process]
GO:0016849 [phosphorus-oxygen lyase activity]
GO:0020037 [heme binding]
GO:0035556 [intracellular signal transduction]
Show all
551 aa
62.8 kDa
No 0
GUCY1B3-003
ENSP00000426786
ENST00000502959
E9PCN2 [Direct mapping]
Guanylate cyclase soluble subunit beta-1
Show all
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004383 [guanylate cyclase activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0006182 [cGMP biosynthetic process]
GO:0007263 [nitric oxide mediated signal transduction]
GO:0008074 [guanylate cyclase complex, soluble]
GO:0009190 [cyclic nucleotide biosynthetic process]
GO:0016849 [phosphorus-oxygen lyase activity]
GO:0020037 [heme binding]
GO:0035556 [intracellular signal transduction]
GO:0043167 [ion binding]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0043234 [protein complex]
GO:0046982 [protein heterodimerization activity]
GO:0051879 [Hsp90 protein binding]
Show all
641 aa
73.1 kDa
No 0
GUCY1B3-004
ENSP00000426319
ENST00000505764
Q02153 [Direct mapping]
Guanylate cyclase soluble subunit beta-1
Show all
Enzymes
   ENZYME proteins
   Lyases
Predicted intracellular proteins
Plasma proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004383 [guanylate cyclase activity]
GO:0004872 [receptor activity]
GO:0005515 [protein binding]
GO:0005525 [GTP binding]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0006182 [cGMP biosynthetic process]
GO:0007263 [nitric oxide mediated signal transduction]
GO:0007596 [blood coagulation]
GO:0008015 [blood circulation]
GO:0008074 [guanylate cyclase complex, soluble]
GO:0009190 [cyclic nucleotide biosynthetic process]
GO:0016849 [phosphorus-oxygen lyase activity]
GO:0020037 [heme binding]
GO:0035556 [intracellular signal transduction]
GO:0038060 [nitric oxide-cGMP-mediated signaling pathway]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0046872 [metal ion binding]
GO:0071732 [cellular response to nitric oxide]
Show all
599 aa
68.2 kDa
No 0
GUCY1B3-005
ENSP00000422313
ENST00000507146
D6RC99 [Direct mapping]
Guanylate cyclase soluble subunit beta-1
Show all
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004383 [guanylate cyclase activity]
GO:0005622 [intracellular]
GO:0006182 [cGMP biosynthetic process]
GO:0009190 [cyclic nucleotide biosynthetic process]
GO:0016849 [phosphorus-oxygen lyase activity]
GO:0020037 [heme binding]
GO:0035556 [intracellular signal transduction]
Show all
594 aa
67.5 kDa
No 0
GUCY1B3-007
ENSP00000264424
ENST00000264424
Q02153 [Direct mapping]
Guanylate cyclase soluble subunit beta-1
Show all
Enzymes
   ENZYME proteins
   Lyases
Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004383 [guanylate cyclase activity]
GO:0004872 [receptor activity]
GO:0005515 [protein binding]
GO:0005525 [GTP binding]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0006182 [cGMP biosynthetic process]
GO:0007263 [nitric oxide mediated signal transduction]
GO:0007596 [blood coagulation]
GO:0008015 [blood circulation]
GO:0008074 [guanylate cyclase complex, soluble]
GO:0009190 [cyclic nucleotide biosynthetic process]
GO:0016849 [phosphorus-oxygen lyase activity]
GO:0020037 [heme binding]
GO:0035556 [intracellular signal transduction]
GO:0038060 [nitric oxide-cGMP-mediated signaling pathway]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0046872 [metal ion binding]
GO:0071732 [cellular response to nitric oxide]
Show all
619 aa
70.5 kDa
No 0
GUCY1B3-008
ENSP00000425065
ENST00000513437
B7Z685 [Direct mapping]
Guanylate cyclase 1, soluble, beta 3, isoform CRA_c; Guanylate cyclase soluble subunit beta-1; cDNA FLJ50853, highly similar to Guanylate cyclase soluble subunit beta-1 (EC 4.6.1.2)
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004383 [guanylate cyclase activity]
GO:0005622 [intracellular]
GO:0006182 [cGMP biosynthetic process]
GO:0009190 [cyclic nucleotide biosynthetic process]
GO:0016849 [phosphorus-oxygen lyase activity]
GO:0020037 [heme binding]
GO:0035556 [intracellular signal transduction]
Show all
551 aa
62.8 kDa
No 0
GUCY1B3-010
ENSP00000420842
ENST00000503520
Q02153 [Direct mapping]
Guanylate cyclase soluble subunit beta-1
Show all
Enzymes
   ENZYME proteins
   Lyases
Predicted intracellular proteins
Plasma proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004383 [guanylate cyclase activity]
GO:0004872 [receptor activity]
GO:0005515 [protein binding]
GO:0005525 [GTP binding]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0006182 [cGMP biosynthetic process]
GO:0007263 [nitric oxide mediated signal transduction]
GO:0007596 [blood coagulation]
GO:0008015 [blood circulation]
GO:0008074 [guanylate cyclase complex, soluble]
GO:0009190 [cyclic nucleotide biosynthetic process]
GO:0016849 [phosphorus-oxygen lyase activity]
GO:0020037 [heme binding]
GO:0035556 [intracellular signal transduction]
GO:0038060 [nitric oxide-cGMP-mediated signaling pathway]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0046872 [metal ion binding]
GO:0071732 [cellular response to nitric oxide]
Show all
586 aa
66.7 kDa
No 0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.