Fields »
ABOUT
HELP
BLOG
CS

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:154.5TPM
GTEx:66.4RPKM
FANTOM5:202.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Medium
Fibroblasts:Medium
 
 

Antibody staining

Antibody HPA038460

  

Antibody HPA038461

  

Antibody CAB075750

  

Antibody CAB075751

  

Antibody CAB075752

  

Antibody CAB075753

  

Antibody CAB075754

  

Adipocytes

 Medium   Medium   Medium   High   Medium  

Chondrocytes

 Not detected   Medium   Medium   Medium   Not detected   Medium  

Fibroblasts

 Low   Medium   High   High  
                
             
             
             

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:High
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA038460

  

Antibody HPA038461

  

Antibody CAB075750

  

Antibody CAB075751

  

Antibody CAB075752

  

Antibody CAB075753

  

Antibody CAB075754

  

Adipocytes

 Medium   High   High   High   High   High  

Fibroblasts

 Low   Medium   High   High   High   High   Medium  

Peripheral nerve

 Medium   Medium   Medium   Medium   Not detected   High   High  
             
             
             

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

154.5
N/A Female, age 80 Sample 1
TPM: 175.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 188.6
N/A Female, age 57 Sample 3
TPM: 173.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 118.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 116.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

66.4

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 64.4
Samples: 350

Max RPKM: 181.2
Min RPKM: 28.4
Std RPKM: 21.9
Median RPKM: 58.0
GTEX-OHPN-0226-SM-48TBV 60-69 years, female 181.2
GTEX-YB5E-2126-SM-5IFI7 40-49 years, male 161.6
GTEX-WY7C-2426-SM-3NB2V 50-59 years, male 146.6
GTEX-ZQG8-1526-SM-5HL65 60-69 years, female 135.9
GTEX-ZYWO-2526-SM-5GIDM 40-49 years, female 129.2
GTEX-11EM3-2326-SM-5H12B 20-29 years, female 125.8
GTEX-R55G-2426-SM-2TC5I 40-49 years, female 124.5
GTEX-WEY5-1926-SM-3GIL8 40-49 years, female 121.2
GTEX-T5JW-1726-SM-3GADN 20-29 years, female 116.3
GTEX-ZP4G-2326-SM-57WEM 20-29 years, female 115.1
Show all
Adipose - Visceral (Omentum)
RPKM: 69.5
Samples: 227

Max RPKM: 208.3
Min RPKM: 29.5
Std RPKM: 32.0
Median RPKM: 57.8
GTEX-W5X1-1426-SM-3GIKH 40-49 years, female 208.3
GTEX-1339X-0726-SM-5L3FF 40-49 years, male 179.9
GTEX-VUSG-1426-SM-3GIJN 50-59 years, male 175.9
GTEX-11I78-0226-SM-5HL6R 50-59 years, female 171.8
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 164.0
GTEX-1122O-0926-SM-5N9C9 60-69 years, female 160.0
GTEX-12696-1826-SM-5EGJS 60-69 years, male 147.8
GTEX-11XUK-1726-SM-5GU61 40-49 years, female 136.8
GTEX-ZLWG-0726-SM-5S2NG 50-59 years, female 131.9
GTEX-WH7G-1126-SM-3NMBK 40-49 years, male 129.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

202.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 202.8
FF:10010-101C1 65,65,76 years, mixed 202.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.