Tissue expression of CS - Staining in skin - The Human Protein Atlas

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CS

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TISSUE

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CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA SKIN

GENE/PROTEIN

Antibody validation

Dictionary
	Skin
	Anal skin


Tissue proteome
	Extended skin samples
	Skin

SKIN - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	55.0	TPM
GTEx:	59.6	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	High
Keratinocytes:	High
Langerhans:	High
Melanocytes:	High

Antibody staining	Antibody HPA038460		Antibody HPA038461		Antibody CAB075750		Antibody CAB075751		Antibody CAB075752		Antibody CAB075753		Antibody CAB075754
Fibroblasts	Medium		High		High		High		High		High		Medium
Keratinocytes	Medium		High		High		High		Medium		High		High
Langerhans	Medium		High		High		High		Medium		High		High
Melanocytes	Medium		High		High		High		High		High		High

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	High

Antibody staining	Antibody HPA038460		Antibody HPA038461		Antibody CAB075750		Antibody CAB075751		Antibody CAB075752		Antibody CAB075753		Antibody CAB075754
Epidermal cells	Medium		High		High		High		High		High		High

SKIN - HPA RNA-seq

Average TPM	55.0

overview

Female, age 34

Sample 1
TPM: 71

Cell types%

Keratinocytes: 60
Other cell types: 40

overview

Female, age 30

Sample 2
TPM: 47.2

Cell types%

Keratinocytes: 55
Other cell types: 45

N/A

Male, age 57

Sample 3
TPM: 46.9

SKIN - GTEx RNA-seq

Average RPKM	59.6

GTEx sample id

Sample description

RPKM

Skin - Not Sun Exposed (Suprapubic)
RPKM: 59.1

Samples: 250

Max RPKM: 99.9
Min RPKM: 41.6
Std RPKM: 10.0
Median RPKM: 57.4

GTEX-WEY5-2326-SM-3GIKK

40-49 years, female

99.9

GTEX-ZY6K-1426-SM-5GZX2

50-59 years, male

92.0

GTEX-11DXX-2126-SM-5PNYR

60-69 years, female

91.7

GTEX-13OVG-1626-SM-5J1NF

60-69 years, male

90.9

GTEX-ZYWO-2226-SM-5GZXR

40-49 years, female

90.3

GTEX-YEC4-1826-SM-4W1YP

40-49 years, male

90.0

GTEX-ZPU1-1126-SM-4YCF3

40-49 years, male

89.6

GTEX-11WQK-1026-SM-5EQLX

50-59 years, male

81.5

GTEX-145LT-0526-SM-5LUB2

40-49 years, male

81.2

GTEX-14B4R-1326-SM-5Q5EZ

30-39 years, male

80.8

Show all

Skin - Sun Exposed (Lower leg)
RPKM: 59.9

Samples: 357

Max RPKM: 94.8
Min RPKM: 34.9
Std RPKM: 9.1
Median RPKM: 58.8

GTEX-11WQK-0526-SM-5EQLD

50-59 years, male

94.8

GTEX-S32W-2126-SM-2XCB1

50-59 years, female

88.5

GTEX-11TT1-2526-SM-5EGIB

20-29 years, male

88.4

GTEX-S7SF-1626-SM-3K2AY

20-29 years, female

87.3

GTEX-WFG8-2226-SM-3GIL9

20-29 years, male

87.0

GTEX-XYKS-2126-SM-4E3IB

60-69 years, female

85.0

GTEX-RU72-0926-SM-2TF6B

50-59 years, female

84.0

GTEX-SJXC-0126-SM-2XCFF

60-69 years, male

83.8

GTEX-139UW-2826-SM-5L3E7

60-69 years, male

82.7

GTEX-QESD-1426-SM-2S1R9

20-29 years, male

81.4

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.