Tissue expression of COL17A1 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	45.3	TPM
GTEx:	41.9	RPKM
FANTOM5:	69.2	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Low

Antibody staining	Antibody HPA043673	Antibody HPA052963
Squamous epithelial cells	Low	Medium

ESOPHAGUS - HPA RNA-seq

Average TPM	45.3

Female, age 70

Sample 1
TPM: 38.7

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 45.8

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 51.5

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	41.9

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 41.9

Samples: 286

Max RPKM: 211.8
Min RPKM: 1.3
Std RPKM: 21.0
Median RPKM: 37.8

GTEX-RUSQ-0826-SM-47JWW

50-59 years, male

211.8

GTEX-S3XE-0926-SM-4AD4S

50-59 years, male

119.5

GTEX-Y111-1626-SM-57WCY

50-59 years, male

118.6

GTEX-1399U-1026-SM-5J1OC

50-59 years, female

103.6

GTEX-X4EO-1226-SM-4QARR

60-69 years, female

98.1

GTEX-11TT1-0526-SM-5P9JO

20-29 years, male

97.5

GTEX-RU72-0726-SM-46MUW

50-59 years, female

97.0

GTEX-ZDYS-0826-SM-4WWCR

50-59 years, male

94.7

GTEX-11XUK-0826-SM-5GU6P

40-49 years, female

94.1

GTEX-TSE9-1226-SM-4DXTM

60-69 years, female

88.5

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	69.2

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 69.2

FF:10015-101C6

68,74,75 years, mixed

69.2