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COL17A1

SKIN - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:770.5TPM
GTEx:208.5RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Medium
Keratinocytes:Low
Langerhans:Low
Melanocytes:Medium
 

Antibody staining

Antibody HPA043673

  

Antibody HPA052963

  

Fibroblasts

 Medium   Not detected  

Keratinocytes

 Low   Low  

Langerhans

 Low   Not detected  

Melanocytes

 Medium   Not detected  
   
   
   

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:Low
 
 
 
 

Antibody staining

Antibody HPA043673

  

Antibody HPA052963

  

Epidermal cells

 Low   Low  
      
      
      
   
   
   

SKIN - HPA RNA-seq

Average TPM

770.5
overview Female, age 34 Sample 1
TPM: 722.7
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30 Sample 2
TPM: 795.7
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57 Sample 3
TPM: 793

SKIN - GTEx RNA-seq

Average RPKM

208.5

GTEx sample id

Sample description

RPKM
Skin - Not Sun Exposed (Suprapubic)
RPKM: 221.9
Samples: 250

Max RPKM: 489.0
Min RPKM: 47.7
Std RPKM: 84.5
Median RPKM: 209.8
GTEX-145MI-0626-SM-5SI8S 60-69 years, female 489.0
GTEX-11P82-1426-SM-5BC5L 20-29 years, male 485.9
GTEX-WHPG-2626-SM-3NMBR 50-59 years, male 465.1
GTEX-ZTX8-1326-SM-4YCEL 20-29 years, male 453.3
GTEX-14C38-0726-SM-5SI6M 50-59 years, male 443.1
GTEX-WY7C-2126-SM-3NB2R 50-59 years, male 434.4
GTEX-XAJ8-1426-SM-47JYM 40-49 years, male 428.2
GTEX-13QBU-1226-SM-5LU4G 40-49 years, female 406.7
GTEX-11ZU8-0126-SM-5EQ58 60-69 years, male 399.9
GTEX-Y114-2126-SM-4TT8B 50-59 years, female 398.6
Show all
Skin - Sun Exposed (Lower leg)
RPKM: 199.1
Samples: 357

Max RPKM: 515.4
Min RPKM: 29.7
Std RPKM: 75.5
Median RPKM: 189.4
GTEX-13YAN-0326-SM-5O9DF 60-69 years, male 515.4
GTEX-ZF2S-2326-SM-4WWCE 50-59 years, female 470.1
GTEX-12WSK-2326-SM-5GCOH 40-49 years, female 414.7
GTEX-145MI-0526-SM-5O9A8 60-69 years, female 412.7
GTEX-13O3O-0126-SM-5KM4E 60-69 years, female 411.5
GTEX-ZY6K-1826-SM-5GZXK 50-59 years, male 402.8
GTEX-11DXZ-2326-SM-5EGGV 50-59 years, male 398.3
GTEX-ZXG5-0126-SM-5GIEU 60-69 years, male 392.2
GTEX-1269C-2526-SM-5EGJ3 60-69 years, female 389.8
GTEX-11OF3-2626-SM-5GU7F 60-69 years, male 388.8
Show all

SKIN - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.