Expression of FAM107B in cancer - Summary

GENERAL INFORMATION
Gene name	FAM107B
Gene description	Family with sequence similarity 107, member B
Protein class	Predicted intracellular proteins Predicted secreted proteins
Predicted localization	Intracellular,Secreted
Number of transcripts	20
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Expressed in all
HPA (normal tissue):	Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression with additional extracellular and plasma positivity in several different tissue types.

ANTIBODY IHC RELIABILITY
Data reliability description	Secreted protein, tissue location of RNA and protein might differ and correlation is complex.
Reliability score	Uncertain based on 1 antibody. HPA039661
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION

STAINING SUMMARY

HPA039661

GENE INFORMATION
Gene name	FAM107B (HGNC Symbol)
Synonyms	C10orf45, FLJ45505, MGC11034
Description	Family with sequence similarity 107, member B (HGNC Symbol)
Entrez gene summary
Chromosome	10
Cytoband	p13
Chromosome location (bp)	14518557 - 14774897
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000065809 (version 83.38)
Entrez gene	83641
UniProt	Q9H098 (UniProt - Evidence at protein level)
neXtProt	NX_Q9H098
Antibodypedia	FAM107B antibodies

PROTEIN BROWSER

FAM107B-001	FAM107B-002	FAM107B-003	FAM107B-004	FAM107B-005	FAM107B-008	FAM107B-009	FAM107B-010	FAM107B-011	FAM107B-012	FAM107B-013	FAM107B-014	FAM107B-015	FAM107B-016	FAM107B-017	FAM107B-018	FAM107B-019	FAM107B-020	FAM107B-021	FAM107B-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
FAM107B-001 ENSP00000181796 ENST00000181796	Q9H098 [Direct mapping] Protein FAM107B Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0007605 [sensory perception of sound] Show all	306 aa 34.8 kDa	Yes	0
FAM107B-002 ENSP00000367731 ENST00000378470	Q9H098 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		131 aa 15.6 kDa	No	0
FAM107B-003 ENSP00000367728 ENST00000378467	Q9H098 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		131 aa 15.6 kDa	No	0
FAM107B-004 ENSP00000418120 ENST00000468747	Q9H098 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		131 aa 15.6 kDa	No	0
FAM107B-005 ENSP00000367719 ENST00000378458	Q9H098 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		131 aa 15.6 kDa	No	0
FAM107B-008 ENSP00000367723 ENST00000378462	Q9H098 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		131 aa 15.6 kDa	No	0
FAM107B-009 ENSP00000418330 ENST00000496330	Q9H098 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		131 aa 15.6 kDa	No	0
FAM107B-010 ENSP00000413676 ENST00000452706	C9JW51 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		128 aa 15.2 kDa	No	0
FAM107B-011 ENSP00000367726 ENST00000378465	Q9H098 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		131 aa 15.6 kDa	No	0
FAM107B-012 ENSP00000420314 ENST00000488576	C9JP05 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		93 aa 11.2 kDa	No	0
FAM107B-013 ENSP00000397949 ENST00000442012	X6RET8 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		90 aa 10.8 kDa	No	0
FAM107B-014 ENSP00000417782 ENST00000478076	Q9H098 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		131 aa 15.6 kDa	No	0
FAM107B-015 ENSP00000420444 ENST00000468492		Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		131 aa 15.6 kDa	No	0
FAM107B-016 ENSP00000419603 ENST00000479731	Q9H098 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		131 aa 15.6 kDa	No	0
FAM107B-017 ENSP00000417242 ENST00000475786	C9J3Q3 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		101 aa 12.2 kDa	No	0
FAM107B-018 ENSP00000417845 ENST00000482277	C9J6Y8 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		84 aa 10 kDa	No	0
FAM107B-019 ENSP00000418395 ENST00000494865	C9J6N5 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		125 aa 14.9 kDa	No	0
FAM107B-020 ENSP00000419064 ENST00000472095	C9JYP1 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		67 aa 8 kDa	No	0
FAM107B-021 ENSP00000420249 ENST00000489100	C9JQ40 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		126 aa 15 kDa	No	0
FAM107B-201 ENSP00000479842 ENST00000622567	Q9H098 [Direct mapping] Protein FAM107B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		131 aa 15.6 kDa	No	0