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SMALL INTESTINE - Expression summary

RNA expression
HPA:32.5TPM
GTEx:12.6RPKM
FANTOM5:68.6Tags Per Million

SMALL INTESTINE - Annotated protein expression

Pending normal tissue analysis

SMALL INTESTINE - HPA RNA-seq

Average TPM

32.5
overview Male, age 65 Sample 1
TPM: 32.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 33.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 34.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 30.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

12.6

GTEx sample id

Sample description

RPKM
Small Intestine - Terminal Ileum
RPKM: 12.6
Samples: 88

Max RPKM: 19.6
Min RPKM: 9.3
Std RPKM: 1.9
Median RPKM: 12.3
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 19.6
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 17.7
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 16.7
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 16.2
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 16.0
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 15.9
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 15.9
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 15.7
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 15.6
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 15.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

68.6

FANTOM5 sample id

Sample description

Tags Per Million
Small intestine
Tags Per Million: 68.6
FF:10024-101D6 15,40,85 years, mixed 68.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.