Expression of MSANTD3 in cancer - Summary - The Human Protein Atlas

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MSANTD3

TISSUE

CELL

PATHOLOGY

GENERAL INFORMATION
Gene name	MSANTD3
Gene description	Myb/SANT-like DNA-binding domain containing 3
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	6
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Expressed in all
HPA (normal tissue):	Expressed in all

Protein evidence

Evidence at protein level

ANTIBODY IHC RELIABILITY
Reliability score	Pending cancer tissue analysis.

PROGNOSTIC SUMMARY
Prognostic marker in renal cancer (unfavourable), liver cancer (unfavourable), head and neck cancer (unfavourable) and lung cancer (unfavourable).
Renal cancer p<0.001 Liver cancer p<0.001 Head and neck cancer p<0.001 Lung cancer p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION
Pending cancer tissue analysis
STAINING SUMMARY

GENE INFORMATION
Gene name	MSANTD3 (HGNC Symbol)
Synonyms	C9orf30, MGC17337
Description	Myb/SANT-like DNA-binding domain containing 3 (HGNC Symbol)
Entrez gene summary
Chromosome	9
Cytoband	q31.1
Chromosome location (bp)	100427156 - 100451711
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000066697 (version 83.38)
Entrez gene	91283
UniProt	Q96H12 (UniProt - Evidence at protein level)
neXtProt	NX_Q96H12
Antibodypedia	MSANTD3 antibodies

PROTEIN BROWSER

MSANTD3-001	MSANTD3-003	MSANTD3-004	MSANTD3-005	MSANTD3-201	MSANTD3-202

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
MSANTD3-001 ENSP00000378506 ENST00000395067	Q96H12 [Direct mapping] Myb/SANT-like DNA-binding domain-containing protein 3 A0A024R171 [Target identity:100%; Query identity:100%] Chromosome 9 open reading frame 30, isoform CRA_a Show all	Predicted intracellular proteins Show all		275 aa 32.4 kDa	No	0
MSANTD3-003 ENSP00000364020 ENST00000374885	Q96H12 [Direct mapping] Myb/SANT-like DNA-binding domain-containing protein 3 Show all	Predicted intracellular proteins Show all		159 aa 18.7 kDa	No	0
MSANTD3-004 ENSP00000364021 ENST00000374886	X6R907 [Direct mapping] Myb/SANT-like DNA-binding domain-containing protein 3 Show all	Predicted intracellular proteins Show all		181 aa 20.9 kDa	No	0
MSANTD3-005 ENSP00000415830 ENST00000398977	X6RL08 [Direct mapping] Myb/SANT-like DNA-binding domain-containing protein 3 Show all	Predicted intracellular proteins Show all		134 aa 15.8 kDa	No	0
MSANTD3-201 ENSP00000480445 ENST00000613183	Q96H12 [Direct mapping] Myb/SANT-like DNA-binding domain-containing protein 3 A0A024R171 [Target identity:100%; Query identity:100%] Chromosome 9 open reading frame 30, isoform CRA_a Show all	Predicted intracellular proteins Show all	GO:0042802 [identical protein binding] Show all	275 aa 32.4 kDa	No	0
MSANTD3-202 ENSP00000480622 ENST00000622639	Q96H12 [Direct mapping] Myb/SANT-like DNA-binding domain-containing protein 3 A0A024R171 [Target identity:100%; Query identity:100%] Chromosome 9 open reading frame 30, isoform CRA_a Show all	Predicted intracellular proteins Show all		275 aa 32.4 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.