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IFI35

COLON - Expression summary

RNA expression
HPA:24.4TPM
GTEx:19.6RPKM
FANTOM5:26.4Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

24.4
overview Male, age 54 Sample 1
TPM: 26.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 18.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 31.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 20.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 21.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 27.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 18.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 35
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 23.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 28.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 28.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 22.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

19.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 18.4
Samples: 149

Max RPKM: 38.6
Min RPKM: 9.4
Std RPKM: 4.7
Median RPKM: 17.9
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 38.6
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 31.5
GTEX-145LS-2926-SM-5O99G 60-69 years, female 30.4
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 28.4
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 28.3
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 27.6
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 26.7
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 26.3
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 26.1
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 25.9
Show all
Colon - Transverse
RPKM: 20.5
Samples: 196

Max RPKM: 49.8
Min RPKM: 6.6
Std RPKM: 6.0
Median RPKM: 19.6
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 49.8
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 45.1
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 37.5
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 34.0
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 34.0
GTEX-QCQG-1626-SM-48U26 50-59 years, female 33.6
GTEX-QLQW-0426-SM-447A7 30-39 years, male 33.1
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 32.8
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 32.8
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 32.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

26.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 26.4
FF:10014-101C5 62,83,84 years, mixed 26.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.