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TFE3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.8TPM
GTEx:27.2RPKM
FANTOM5:56.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA023881

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

6.8
overview Male, age 54 Sample 1
TPM: 9.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 5.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 8.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 4.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 8.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 5.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 7.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 10.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 6.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

27.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 33.2
Samples: 149

Max RPKM: 58.8
Min RPKM: 19.9
Std RPKM: 7.7
Median RPKM: 31.7
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 58.8
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 56.2
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 55.8
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 53.3
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 52.3
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 51.5
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 51.5
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 51.4
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 50.2
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 49.1
Show all
Colon - Transverse
RPKM: 22.6
Samples: 196

Max RPKM: 67.0
Min RPKM: 9.4
Std RPKM: 10.1
Median RPKM: 20.0
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 67.0
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 61.2
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 51.5
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 48.4
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 47.0
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 46.7
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 45.3
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 43.4
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 41.5
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 41.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

56.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 56.5
FF:10014-101C5 62,83,84 years, mixed 56.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.