Expression of TTC7A in cancer - Summary - The Human Protein Atlas

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TTC7A

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	TTC7A
Gene description	Tetratricopeptide repeat domain 7A
Protein class	Disease related genes Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	3
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Expressed in all
HPA (normal tissue):	Mixed

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Ubiquitous cytoplasmic expression, which often had a granular pattern.

ANTIBODY IHC RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification.
Reliability score	Approved based on 2 antibodies. HPA036781 , HPA036782
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PROGNOSTIC SUMMARY
Prognostic marker in ovarian cancer (unfavourable).
Ovarian cancer p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA036781	HPA036782

GENE INFORMATION
Gene name	TTC7A (HGNC Symbol)
Synonyms	KIAA1140, TTC7
Description	Tetratricopeptide repeat domain 7A (HGNC Symbol)
Entrez gene summary	This gene encodes a protein containing tetratricopeptide repeats. Mutations in this gene disrupt intestinal development and can cause early onset inflammatory bowel disease and intestinal atresia. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2014]
Chromosome	2
Cytoband	p21
Chromosome location (bp)	46916157 - 47076137
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000068724 (version 83.38)
Entrez gene	57217
UniProt	Q9ULT0 (UniProt - Evidence at protein level)
neXtProt	NX_Q9ULT0
Antibodypedia	TTC7A antibodies

PROTEIN BROWSER

TTC7A-001	TTC7A-002	TTC7A-005

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
TTC7A-001 ENSP00000316699 ENST00000319190	Q9ULT0 [Direct mapping] Tetratricopeptide repeat protein 7A Show all	SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Disease related genes Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] Show all	858 aa 96.2 kDa	No	0
TTC7A-002 ENSP00000378320 ENST00000394850	Q9ULT0 [Direct mapping] Tetratricopeptide repeat protein 7A Show all	SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Disease related genes Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005623 [cell] GO:0006879 [cellular iron ion homeostasis] GO:0030097 [hemopoiesis] Show all	882 aa 98.9 kDa	No	0
TTC7A-005 ENSP00000386307 ENST00000409245	G5E9G4 [Direct mapping] Tetratricopeptide repeat domain 7A, isoform CRA_a; Tetratricopeptide repeat protein 7A Show all	SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] Show all	824 aa 92.7 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.