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CFAP20

GENERAL INFORMATION

Gene name

 CFAP20

Gene description

 Cilia and flagella associated protein 20

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 2
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HUMAN PROTEIN ATLAS INFORMATION

RNA category
TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

 Evidence at protein level

Protein expression
normal tissue

 General cytoplasmic expression.

ANTIBODY IHC RELIABILITY

Data reliability
description

 Antibody staining mainly consistent with RNA expression data.

Reliability score

 Uncertain based on 1 antibody.
HPA018195
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION
Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY
HPA018195

GENE INFORMATION

Gene name

 CFAP20 (HGNC Symbol)

Synonyms

 C16orf80, fSAP23, GTL3

Description

 Cilia and flagella associated protein 20 (HGNC Symbol)

Entrez gene summary

Chromosome

 16

Cytoband

 q21

Chromosome location (bp)

 58113588 - 58129450

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000070761 (version 83.38)

Entrez gene

 29105

UniProt

 Q9Y6A4 (UniProt - Evidence at protein level)

neXtProt

 NX_Q9Y6A4

Antibodypedia

 CFAP20 antibodies

PROTEIN BROWSER
CFAP20-001
CFAP20-007

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
CFAP20-001
ENSP00000262498
ENST00000262498
Q9Y6A4 [Direct mapping]
Cilia- and flagella-associated protein 20
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Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0005634 [nucleus]
GO:0005814 [centriole]
GO:0005874 [microtubule]
GO:0005929 [cilium]
GO:0007275 [multicellular organismal development]
GO:0018095 [protein polyglutamylation]
GO:0036064 [ciliary basal body]
GO:0044822 [poly(A) RNA binding]
GO:0060271 [cilium morphogenesis]
GO:0060296 [regulation of cilium beat frequency involved in ciliary motility]
GO:0070062 [extracellular exosome]
GO:2000147 [positive regulation of cell motility]
GO:2000253 [positive regulation of feeding behavior]
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 193 aa
22.8 kDa 		No 0
CFAP20-007
ENSP00000455220
ENST00000565880
H3BPA3 [Direct mapping]
Cilia- and flagella-associated protein 20
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
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 109 aa
12.4 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.