Tissue expression of TCOF1 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	13.1	TPM
GTEx:	8.2	RPKM
FANTOM5:	7.2	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Low
Peripheral nerve:	Not available
Chondrocytes:	Not detected

Antibody staining	Antibody HPA038237	Antibody HPA038238	Antibody CAB033199
Adipocytes	Not detected	Not detected	Low
Fibroblasts	Not detected	Low	Low
Peripheral nerve	Medium	Not detected
Chondrocytes	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Chondrocytes:	Not available
Fibroblasts:	Low
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA038237	Antibody HPA038238	Antibody CAB033199
Adipocytes	Not detected	Not detected	Medium
Chondrocytes	Not detected	Medium
Fibroblasts	Not detected	Not detected	Low
Peripheral nerve	Not detected	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	13.1

Female, age 80

Sample 1
TPM: 15.7

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 11.5

Female, age 57

Sample 3
TPM: 9.8

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 19.2

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 9.1

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	8.2

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 8.6

Samples: 350

Max RPKM: 16.1
Min RPKM: 3.7
Std RPKM: 1.8
Median RPKM: 8.4

GTEX-ZYVF-0226-SM-5GIEG

50-59 years, female

16.1

GTEX-OOBK-0226-SM-2YUMF

40-49 years, male

14.8

GTEX-XK95-0426-SM-4AT4R

40-49 years, male

14.6

GTEX-11EQ8-0226-SM-5EQ5G

60-69 years, male

13.9

GTEX-UTHO-0426-SM-5SI7N

60-69 years, male

13.8

GTEX-NPJ8-0226-SM-48TBN

40-49 years, male

13.7

GTEX-QEG5-0326-SM-2S1PB

20-29 years, male

13.6

GTEX-13NZ8-0926-SM-5MR3U

60-69 years, female

13.1

GTEX-O5YV-0226-SM-48TBY

60-69 years, female

13.1

GTEX-OIZH-0226-SM-2YUMH

50-59 years, male

13.1

Show all

Adipose - Visceral (Omentum)
RPKM: 7.6

Samples: 227

Max RPKM: 18.2
Min RPKM: 3.8
Std RPKM: 1.9
Median RPKM: 7.4

GTEX-ZYVF-1026-SM-5E44V

50-59 years, female

18.2

GTEX-X585-2526-SM-4QAS1

50-59 years, male

15.6

GTEX-13IVO-2426-SM-5K7V9

70-79 years, male

13.7

GTEX-ZAJG-1626-SM-5HL7I

50-59 years, female

13.2

GTEX-13S86-0926-SM-5SI6I

40-49 years, male

13.0

GTEX-XXEK-1426-SM-4BRW1

50-59 years, male

12.8

GTEX-12584-2126-SM-5FQUM

40-49 years, male

11.8

GTEX-11WQK-1526-SM-5EGKN

50-59 years, male

11.4

GTEX-12WSA-1626-SM-5EGJV

60-69 years, male

11.4

GTEX-14A6H-1026-SM-5SIAZ

30-39 years, male

11.2

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	7.2

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 7.2

FF:10010-101C1

65,65,76 years, mixed

7.2