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TCOF1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:10.1TPM
GTEx:10.5RPKM
FANTOM5:12.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA038237

  

Antibody HPA038238

  

Antibody CAB033199

  

Endothelial cells

 Medium   Low   Low  

Glandular cells

 Medium   Medium   Medium  

Peripheral nerve/ganglion

 Medium   Not detected  
     
     
     

COLON - HPA RNA-seq

Average TPM

10.1
overview Male, age 54 Sample 1
TPM: 8.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 9.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 11
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 8.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 8.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 11.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 8.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 12.5
Samples: 149

Max RPKM: 20.3
Min RPKM: 8.0
Std RPKM: 2.5
Median RPKM: 12.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 20.3
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 19.3
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 19.2
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 18.2
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 18.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 18.0
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 17.7
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 17.3
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 17.2
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 16.8
Show all
Colon - Transverse
RPKM: 9.0
Samples: 196

Max RPKM: 16.7
Min RPKM: 2.7
Std RPKM: 2.9
Median RPKM: 9.0
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 16.7
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 15.7
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 15.6
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 15.5
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 15.2
GTEX-QMRM-1226-SM-447C6 50-59 years, male 14.8
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 14.4
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 14.4
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 14.3
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 14.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

12.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 12.1
FF:10014-101C5 62,83,84 years, mixed 12.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.