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SLC35C2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:18.1TPM
GTEx:12.5RPKM
FANTOM5:21.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA027011

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 High  
 
 
 

COLON - HPA RNA-seq

Average TPM

18.1
overview Male, age 54 Sample 1
TPM: 25
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 24.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 23.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 14.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 16.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 13.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 11.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 14.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 15.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 20.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 18.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 18.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 17.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

12.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 11.1
Samples: 149

Max RPKM: 16.7
Min RPKM: 5.6
Std RPKM: 2.3
Median RPKM: 10.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 16.7
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 16.5
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 16.5
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 16.0
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 15.7
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 15.6
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 15.5
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 15.3
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 14.7
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 14.7
Show all
Colon - Transverse
RPKM: 13.6
Samples: 196

Max RPKM: 19.9
Min RPKM: 6.8
Std RPKM: 2.6
Median RPKM: 13.6
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 19.9
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 19.4
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 19.0
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 18.9
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 18.7
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 18.5
GTEX-QV31-0826-SM-4R1KR 30-39 years, male 18.1
GTEX-13111-0726-SM-5DUVE 50-59 years, male 18.0
GTEX-QCQG-1626-SM-48U26 50-59 years, female 18.0
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 18.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

21.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 21.7
FF:10014-101C5 62,83,84 years, mixed 21.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.