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COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:0.3TPM
GTEx:0.2RPKM

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA007269

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

0.3
overview Male, age 54 Sample 1
TPM: 0.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.0
Samples: 149

Max RPKM: 0.5
Min RPKM: 0.0
Std RPKM: 0.0
Median RPKM: 0.0
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 0.5
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 0.5
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 0.3
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 0.3
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 0.1
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 0.1
GTEX-V955-1726-SM-4JBHF 60-69 years, male 0.1
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 0.1
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 0.1
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 0.1
Show all
Colon - Transverse
RPKM: 0.3
Samples: 196

Max RPKM: 6.0
Min RPKM: 0.0
Std RPKM: 0.4
Median RPKM: 0.2
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 6.0
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 1.4
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 1.2
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 1.0
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 1.0
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 1.0
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 1.0
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 0.9
GTEX-OHPM-1426-SM-3TW8Y 50-59 years, male 0.9
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 0.8
Show all

COLON - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.