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RAB21

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:4.0TPM
GTEx:10.3RPKM
FANTOM5:101.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA016988

  

Antibody CAB037048

  

Endothelial cells

 Low   High  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 Low   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

4.0
overview Male, age 54 Sample 1
TPM: 4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 4.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 4.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 11.5
Samples: 149

Max RPKM: 25.1
Min RPKM: 7.4
Std RPKM: 2.4
Median RPKM: 11.3
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 25.1
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 19.2
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 18.5
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 18.3
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 17.3
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 17.2
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 16.8
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 16.3
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 16.1
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 15.8
Show all
Colon - Transverse
RPKM: 9.4
Samples: 196

Max RPKM: 18.2
Min RPKM: 5.3
Std RPKM: 2.6
Median RPKM: 8.8
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 18.2
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 17.9
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 17.3
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 16.3
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 16.0
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 15.9
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 15.9
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 15.8
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 15.8
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 15.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

101.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 101.7
FF:10014-101C5 62,83,84 years, mixed 101.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.