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CLDND1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:36.1TPM
GTEx:18.5RPKM
FANTOM5:78.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA029841

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

36.1
overview Male, age 54 Sample 1
TPM: 37.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 31.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 21.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 29.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 27.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 50.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 35.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 36
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 46
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 28.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 38.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 48.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 38.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

18.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 21.6
Samples: 149

Max RPKM: 37.9
Min RPKM: 14.1
Std RPKM: 3.6
Median RPKM: 21.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 37.9
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 32.1
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 30.7
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 30.0
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 28.2
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 27.6
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 27.5
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 27.3
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 27.1
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 26.6
Show all
Colon - Transverse
RPKM: 16.2
Samples: 196

Max RPKM: 32.4
Min RPKM: 6.7
Std RPKM: 5.5
Median RPKM: 14.5
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 32.4
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 31.7
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 29.6
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 29.0
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 28.9
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 28.8
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 27.8
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 27.7
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 27.4
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 27.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

78.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 78.0
FF:10014-101C5 62,83,84 years, mixed 78.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.