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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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PPIE
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

PPIE

Gene description

Peptidylprolyl isomerase E (cyclophilin E)

Protein class

Enzymes
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

7
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Ubiquitous nuclear expression.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Approved based on 1 antibody.
HPA020131
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (unfavourable) and liver cancer (unfavourable).
Renal cancer p<0.001
Liver cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA020131

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most malignant cells exhibited weak to moderate nuclear immunoreactivity. Cases of colorectal cancers and malignant melanomas showed strong staining. Most malignant lymphomas, lung, gastric, pancreatic and liver cancers were negative.

GENE INFORMATION

Gene name

PPIE (HGNC Symbol)

Synonyms

CyP-33, MGC111222, MGC3736

Description

Peptidylprolyl isomerase E (cyclophilin E) (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene is a member of the peptidyl-prolyl cis-trans isomerase (PPIase) family. PPIases catalyze the cis-trans isomerization of proline imidic peptide bonds in oligopeptides and accelerate the folding of proteins. This protein contains a highly conserved cyclophilin (CYP) domain as well as an RNA-binding domain. It was shown to possess PPIase and protein folding activities, and it also exhibits RNA-binding activity. Alternative splicing results in multiple transcript variants. A related pseudogene, which is also located on chromosome 1, has been identified. [provided by RefSeq, Aug 2010]

Chromosome

1

Cytoband

p34.2

Chromosome location (bp)

39692182 - 39763914

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000084072 (version 83.38)

Entrez gene

10450

UniProt

Q9UNP9 (UniProt - Evidence at protein level)

neXtProt

NX_Q9UNP9

Antibodypedia

PPIE antibodies

PROTEIN BROWSER

PPIE-001
PPIE-002
PPIE-003
PPIE-006
PPIE-007
PPIE-008
PPIE-009

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

PPIE-001
ENSP00000312769
ENST00000324379
Q9UNP9 [Direct mapping]
Peptidyl-prolyl cis-trans isomerase E
Show all
Enzymes
   ENZYME proteins
   Isomerase
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0000398 [mRNA splicing, via spliceosome]
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006281 [DNA repair]
GO:0006283 [transcription-coupled nucleotide-excision repair]
GO:0006289 [nucleotide-excision repair]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006457 [protein folding]
GO:0016018 [cyclosporin A binding]
GO:0044822 [poly(A) RNA binding]
GO:0045070 [positive regulation of viral genome replication]
GO:0071013 [catalytic step 2 spliceosome]
Show all
301 aa
33.4 kDa
No 0
PPIE-002
ENSP00000348904
ENST00000356511
Q9UNP9 [Direct mapping]
Peptidyl-prolyl cis-trans isomerase E
Show all
Enzymes
   ENZYME proteins
   Isomerase
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0000398 [mRNA splicing, via spliceosome]
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006281 [DNA repair]
GO:0006283 [transcription-coupled nucleotide-excision repair]
GO:0006289 [nucleotide-excision repair]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006457 [protein folding]
GO:0016018 [cyclosporin A binding]
GO:0044822 [poly(A) RNA binding]
GO:0045070 [positive regulation of viral genome replication]
GO:0071013 [catalytic step 2 spliceosome]
Show all
296 aa
33.1 kDa
No 0
PPIE-003
ENSP00000361918
ENST00000372830
Q9UNP9 [Direct mapping]
Peptidyl-prolyl cis-trans isomerase E
Show all
Enzymes
   ENZYME proteins
   Isomerase
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0000398 [mRNA splicing, via spliceosome]
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006281 [DNA repair]
GO:0006283 [transcription-coupled nucleotide-excision repair]
GO:0006289 [nucleotide-excision repair]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006457 [protein folding]
GO:0016018 [cyclosporin A binding]
GO:0044822 [poly(A) RNA binding]
GO:0045070 [positive regulation of viral genome replication]
GO:0071013 [catalytic step 2 spliceosome]
Show all
314 aa
35 kDa
No 0
PPIE-006
ENSP00000433475
ENST00000497370
E9PKY5 [Direct mapping]
Peptidyl-prolyl cis-trans isomerase
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0006457 [protein folding]
Show all
213 aa
23.8 kDa
No 0
PPIE-007
ENSP00000361925
ENST00000372835
E9PEQ6 [Direct mapping]
Peptidyl-prolyl cis-trans isomerase
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003676 [nucleic acid binding]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0006457 [protein folding]
Show all
250 aa
27.7 kDa
No 0
PPIE-008
ENSP00000436689
ENST00000470018
E9PIB0 [Direct mapping]
Peptidyl-prolyl cis-trans isomerase E
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0006457 [protein folding]
Show all
72 aa
8.2 kDa
No 0
PPIE-009
ENSP00000431714
ENST00000470213
E9PK21 [Direct mapping]
Peptidyl-prolyl cis-trans isomerase E
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003676 [nucleic acid binding]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0006457 [protein folding]
Show all
208 aa
22.8 kDa
No 0

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