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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:10.7TPM
GTEx:10.0RPKM
FANTOM5:24.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Low
Fibroblasts:Low
 

Antibody staining

Antibody HPA039722

  

Antibody HPA040155

  

Adipocytes

 Not detected   Not detected  

Chondrocytes

 Not detected   Medium  

Fibroblasts

 Not detected   Medium  
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA039722

  

Antibody HPA040155

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Not detected   Not detected  
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

10.7
N/A Female, age 80 Sample 1
TPM: 10.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 10
N/A Female, age 57 Sample 3
TPM: 9.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 14.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 9.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

10.0

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 11.2
Samples: 350

Max RPKM: 22.9
Min RPKM: 3.8
Std RPKM: 3.5
Median RPKM: 11.0
GTEX-11TTK-0226-SM-5N9EC 60-69 years, female 22.9
GTEX-ZDTS-0226-SM-5HL7Q 60-69 years, male 21.6
GTEX-13PLJ-0126-SM-5L3HU 60-69 years, female 21.2
GTEX-UTHO-0426-SM-5SI7N 60-69 years, male 20.9
GTEX-131YS-0226-SM-5IJEH 60-69 years, female 20.7
GTEX-XQ3S-1626-SM-4WAYN 20-29 years, male 20.7
GTEX-X638-0226-SM-47JZ9 70-79 years, female 20.4
GTEX-11ONC-2526-SM-5986W 60-69 years, male 19.1
GTEX-13FTY-0626-SM-5L3F8 40-49 years, female 18.5
GTEX-WVJS-0226-SM-4MVOU 50-59 years, male 18.3
Show all
Adipose - Visceral (Omentum)
RPKM: 8.0
Samples: 227

Max RPKM: 17.8
Min RPKM: 2.1
Std RPKM: 3.2
Median RPKM: 7.5
GTEX-ZC5H-1626-SM-5HL7L 40-49 years, female 17.8
GTEX-ZDXO-2326-SM-5LU9W 60-69 years, male 17.5
GTEX-YJ89-1926-SM-5IFJ6 60-69 years, male 16.8
GTEX-113JC-0726-SM-5GZZR 50-59 years, female 15.8
GTEX-YECK-1426-SM-5IFHE 60-69 years, male 15.8
GTEX-14DAQ-2526-SM-5RQIO 60-69 years, female 15.6
GTEX-14A6H-1026-SM-5SIAZ 30-39 years, male 15.5
GTEX-13OW7-1126-SM-5K7V6 50-59 years, male 15.3
GTEX-ZDTS-1826-SM-5S2N6 60-69 years, male 15.3
GTEX-13VXU-1026-SM-5KLZE 50-59 years, male 15.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

24.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 24.5
FF:10010-101C1 65,65,76 years, mixed 24.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.