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ABCC6

COLON - Expression summary

RNA expression
HPA:3.0TPM
GTEx:1.3RPKM

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

3.0
overview Male, age 54 Sample 1
TPM: 5.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 2.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.3
Samples: 149

Max RPKM: 1.4
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.2
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 1.4
GTEX-V955-1726-SM-4JBHF 60-69 years, male 1.3
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 1.3
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 1.2
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 0.9
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 0.7
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 0.7
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 0.6
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 0.6
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 0.5
Show all
Colon - Transverse
RPKM: 2.0
Samples: 196

Max RPKM: 5.9
Min RPKM: 0.0
Std RPKM: 1.5
Median RPKM: 1.9
GTEX-R55G-1226-SM-48FDC 40-49 years, female 5.9
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 5.9
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 5.9
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 5.8
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 5.7
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 5.2
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 5.1
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 5.0
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 4.9
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 4.8
Show all

COLON - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.