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ALKBH5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:24.8TPM
GTEx:39.6RPKM
FANTOM5:116.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
 

Antibody staining

Antibody HPA007196

  

Endothelial cells

 High  

Glandular cells

 High  
 

COLON - HPA RNA-seq

Average TPM

24.8
overview Male, age 54 Sample 1
TPM: 37.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 26.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 22
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 30.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 16.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 22.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 13.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 21
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 24.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 28
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 24.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 37.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 17.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

39.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 48.7
Samples: 149

Max RPKM: 74.0
Min RPKM: 29.7
Std RPKM: 8.2
Median RPKM: 48.4
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 74.0
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 68.4
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 66.6
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 64.2
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 63.7
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 62.4
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 62.3
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 62.2
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 62.2
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 61.7
Show all
Colon - Transverse
RPKM: 32.6
Samples: 196

Max RPKM: 79.5
Min RPKM: 16.4
Std RPKM: 11.5
Median RPKM: 29.0
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 79.5
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 66.8
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 57.6
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 57.4
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 56.9
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 54.7
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 54.6
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 54.6
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 54.5
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 53.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

116.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 116.3
FF:10014-101C5 62,83,84 years, mixed 116.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.