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SPAG7

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:37.7TPM
GTEx:18.6RPKM
FANTOM5:65.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA024032

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

37.7
overview Male, age 54 Sample 1
TPM: 36.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 32
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 31.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 43.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 27.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 51.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 27.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 28.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 42.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 45.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 38.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 50.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 34.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

18.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 21.0
Samples: 149

Max RPKM: 30.9
Min RPKM: 10.5
Std RPKM: 3.6
Median RPKM: 21.1
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 30.9
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 30.5
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 30.5
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 30.0
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 28.9
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 27.0
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 26.8
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 26.7
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 26.6
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 26.3
Show all
Colon - Transverse
RPKM: 16.8
Samples: 196

Max RPKM: 28.2
Min RPKM: 7.0
Std RPKM: 3.2
Median RPKM: 16.4
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 28.2
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 27.9
GTEX-SE5C-1526-SM-4BRWU 40-49 years, female 26.5
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 26.2
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 25.4
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 24.8
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 23.2
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 22.3
GTEX-11GSP-1626-SM-5986N 60-69 years, female 21.9
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 21.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

65.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 65.0
FF:10014-101C5 62,83,84 years, mixed 65.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.