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HNRNPC

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:280.8TPM
GTEx:39.8RPKM
FANTOM5:15.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA051075

  

Antibody CAB005223

  

Antibody CAB075755

  

Antibody CAB075756

  

Endothelial cells

 Medium   High   Medium   Medium  

Glandular cells

 High   High   High   High  

Peripheral nerve/ganglion

 Medium   Medium   Low  
       
       
       

COLON - HPA RNA-seq

Average TPM

280.8
overview Male, age 54 Sample 1
TPM: 258.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 274.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 267.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 301
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 245.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 291
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 394.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 250.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 269.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 325.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 280.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 302.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 189.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

39.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 39.7
Samples: 149

Max RPKM: 75.6
Min RPKM: 26.3
Std RPKM: 7.0
Median RPKM: 38.9
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 75.6
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 56.9
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 56.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 55.5
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 55.2
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 55.1
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 53.4
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 53.0
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 52.5
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 52.2
Show all
Colon - Transverse
RPKM: 39.9
Samples: 196

Max RPKM: 92.0
Min RPKM: 18.1
Std RPKM: 9.0
Median RPKM: 38.7
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 92.0
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 73.9
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 61.1
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 61.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 60.1
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 59.8
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 55.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 55.5
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 54.6
GTEX-1128S-1626-SM-5H12O 60-69 years, female 54.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

15.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 15.5
FF:10014-101C5 62,83,84 years, mixed 15.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.