We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
HNRNPC
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:290.8TPM
GTEx:43.8RPKM
FANTOM5:16.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA051075

 

Antibody CAB005223

 

Antibody CAB075755

 

Antibody CAB075756

 

Glandular cells

High   High   Medium   Medium  
       
       
       

SMALL INTESTINE - HPA RNA-seq

Average TPM

290.8

overview Male, age 65 Sample 1
TPM: 276.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 288.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 308.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 290.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

43.8

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 43.8
Samples: 88

Max RPKM: 83.0
Min RPKM: 19.1
Std RPKM: 11.2
Median RPKM: 43.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 83.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 76.7
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 65.2
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 63.2
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 61.9
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 60.7
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 60.0
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 59.3
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 59.0
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 59.0
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 57.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 56.8
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 55.3
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 54.3
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 53.8
GTEX-13O61-1326-SM-5KM31 60-69 years, male 53.6
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 53.2
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 52.6
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 52.5
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 52.0
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 51.9
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 51.4
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 51.2
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 50.0
GTEX-1192X-2526-SM-59868 50-59 years, male 49.7
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 49.0
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 48.7
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 48.1
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 47.9
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 46.7
GTEX-117YX-0326-SM-5GICL 50-59 years, male 46.6
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 46.6
GTEX-13111-1426-SM-5DUW3 50-59 years, male 46.3
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 46.3
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 46.0
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 45.2
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 44.9
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 44.8
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 44.5
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 44.3
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 44.2
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 43.8
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 43.8
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 43.7
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 42.9
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 42.2
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 42.2
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 41.7
GTEX-ZYWO-1526-SM-5SIAL 40-49 years, female 41.6
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 41.5
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 40.7
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 40.1
GTEX-13113-1226-SM-5EGHT 60-69 years, female 39.9
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 39.9
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 39.9
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 39.5
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 38.8
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 38.6
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 38.0
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 38.0
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 37.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 37.2
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 36.9
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 36.4
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 36.0
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 35.8
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 35.8
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 35.4
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 35.0
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 34.9
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 34.7
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 34.5
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 34.0
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 33.9
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 32.7
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 32.5
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 32.0
GTEX-ZTSS-0926-SM-59865 40-49 years, male 31.1
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 30.7
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 30.0
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 29.7
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 29.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 28.2
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 27.1
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 26.8
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 25.9
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 24.3
GTEX-111YS-1426-SM-5GID8 60-69 years, male 19.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

16.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 16.9
FF:10024-101D6 15,40,85 years, mixed 16.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.