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CDC7

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:3.1TPM
GTEx:1.7RPKM
FANTOM5:4.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 
 

Antibody staining

Antibody HPA035831

  

Antibody CAB002669

  

Endothelial cells

 Low   Not detected  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Not detected   Low  
      
   
   

COLON - HPA RNA-seq

Average TPM

3.1
overview Male, age 54 Sample 1
TPM: 2.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 3.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 3.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.6
Samples: 149

Max RPKM: 18.3
Min RPKM: 0.1
Std RPKM: 2.1
Median RPKM: 0.9
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 18.3
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 7.8
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 7.3
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 7.2
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 6.7
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 6.7
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 6.3
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 6.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 5.3
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 5.2
Show all
Colon - Transverse
RPKM: 1.7
Samples: 196

Max RPKM: 7.9
Min RPKM: 0.2
Std RPKM: 1.1
Median RPKM: 1.4
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 7.9
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 6.7
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 6.2
GTEX-144GN-1126-SM-5LU33 50-59 years, male 5.1
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 4.8
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 4.8
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 4.1
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 4.0
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 3.9
GTEX-Y114-1526-SM-4TT79 50-59 years, female 3.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

4.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 4.5
FF:10014-101C5 62,83,84 years, mixed 4.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.