Expression of OCEL1 in cancer - Summary - The Human Protein Atlas

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OCEL1

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	OCEL1
Gene description	Occludin/ELL domain containing 1
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	7
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Expressed in all
HPA (normal tissue):	Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

General cytoplasmic expression.

ANTIBODY IHC RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA042070
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA042070

GENE INFORMATION
Gene name	OCEL1 (HGNC Symbol)
Synonyms	FLJ22709
Description	Occludin/ELL domain containing 1 (HGNC Symbol)
Entrez gene summary
Chromosome	19
Cytoband	p13.11
Chromosome location (bp)	17226204 - 17229219
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000099330 (version 83.38)
Entrez gene	79629
UniProt	Q9H607 (UniProt - Evidence at transcript level)
neXtProt	NX_Q9H607
Antibodypedia	OCEL1 antibodies

PROTEIN BROWSER

OCEL1-001	OCEL1-003	OCEL1-006	OCEL1-008	OCEL1-009	OCEL1-014	OCEL1-015

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
OCEL1-001 ENSP00000215061 ENST00000215061	Q9H607 [Direct mapping] Occludin/ELL domain-containing protein 1 Show all	Predicted intracellular proteins Show all		264 aa 29.4 kDa	No	0
OCEL1-003 ENSP00000471311 ENST00000598068	M0R0L3 [Direct mapping] Occludin/ELL domain-containing protein 1 Show all	Predicted intracellular proteins Show all		246 aa 27.6 kDa	No	0
OCEL1-006 ENSP00000471201 ENST00000601529	M0R0F7 [Direct mapping] Occludin/ELL domain-containing protein 1 Show all	Predicted intracellular proteins Show all		165 aa 17.8 kDa	No	0
OCEL1-008 ENSP00000469261 ENST00000600232	M0QXM2 [Direct mapping] Occludin/ELL domain-containing protein 1 Show all	Predicted intracellular proteins Show all		244 aa 26.7 kDa	No	0
OCEL1-009 ENSP00000470270 ENST00000597836	M0QZ36 [Direct mapping] Occludin/ELL domain-containing protein 1 Show all	Predicted intracellular proteins Show all		208 aa 23.4 kDa	No	0
OCEL1-014 ENSP00000470883 ENST00000595573	M0QZZ7 [Direct mapping] Occludin/ELL domain-containing protein 1 Show all	Predicted intracellular proteins Show all		95 aa 10.8 kDa	No	0
OCEL1-015 ENSP00000469624 ENST00000600826	M0QY63 [Direct mapping] Occludin/ELL domain-containing protein 1 Show all	Phobius predicted membrane proteins SCAMPI predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Show all	GO:0016021 [integral component of membrane] Show all	68 aa 7.8 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.