Tissue expression of SMARCB1 - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	18.4	TPM
GTEx:	22.3	RPKM
FANTOM5:	29.0	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Glandular cells:	Medium
Myoepithelial cells:	Low

Antibody staining	Antibody HPA018248	Antibody HPA019127	Antibody CAB009196
Adipocytes	Low	Medium	Low
Glandular cells	Medium	High	Low
Myoepithelial cells	Low	Medium	Low

BREAST - HPA RNA-seq

Average TPM	18.4

Female, age 52

Sample 1
TPM: 19.4

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 17

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 20.5

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 16.6

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	22.3

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 22.3

Samples: 214

Max RPKM: 46.2
Min RPKM: 12.3
Std RPKM: 5.7
Median RPKM: 21.6

GTEX-14AS3-1626-SM-5S2OY

40-49 years, female

46.2

GTEX-14ABY-2126-SM-5QGQZ

50-59 years, male

45.7

GTEX-VUSG-2226-SM-4KKZO

50-59 years, male

39.4

GTEX-13NZB-2126-SM-5MR4Y

30-39 years, male

35.7

GTEX-131YS-0626-SM-5EGKL

60-69 years, female

34.8

GTEX-ZY6K-1626-SM-5GZWV

50-59 years, male

34.8

GTEX-11TT1-2126-SM-5GU5Y

20-29 years, male

34.6

GTEX-13NZ9-1026-SM-5MR5K

50-59 years, male

34.2

GTEX-X4XY-0926-SM-4E3JD

60-69 years, male

33.9

GTEX-145LT-0726-SM-5S2VM

40-49 years, male

32.0

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	29.0

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 29.0

FF:10080-102A8

77 years, female

29.0