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SMARCB1

ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:20.6TPM
GTEx:21.3RPKM
FANTOM5:35.1Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:High
 

Antibody staining

Antibody HPA018248

  

Antibody HPA019127

  

Antibody CAB009196

  

Squamous epithelial cells

 High   High   Medium  
     
     
     

ESOPHAGUS - HPA RNA-seq

Average TPM

20.6
overview Female, age 70 Sample 1
TPM: 24
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 17.9
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 19.9
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

21.3

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 21.3
Samples: 286

Max RPKM: 34.6
Min RPKM: 9.7
Std RPKM: 3.7
Median RPKM: 20.8
GTEX-TMMY-1126-SM-4DXSX 40-49 years, female 34.6
GTEX-13O1R-1326-SM-5IJF5 60-69 years, male 32.8
GTEX-ZTX8-0226-SM-5E44D 20-29 years, male 31.6
GTEX-RU72-0726-SM-46MUW 50-59 years, female 31.1
GTEX-RUSQ-0826-SM-47JWW 50-59 years, male 31.0
GTEX-11DXX-1126-SM-5GZZK 60-69 years, female 29.6
GTEX-13X6I-1026-SM-5LU4C 60-69 years, male 29.1
GTEX-13X6H-1326-SM-5LU42 50-59 years, female 28.7
GTEX-12WSA-1426-SM-5EGJU 60-69 years, male 28.5
GTEX-131XF-0826-SM-5GICG 60-69 years, male 28.2
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

35.1

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 35.1
FF:10015-101C6 68,74,75 years, mixed 35.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.