Tissue expression of SMARCB1 - Staining in kidney

KIDNEY - Expression summary

Protein expression

RNA expression

HPA:	17.3	TPM
GTEx:	23.6	RPKM
FANTOM5:	52.2	Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:	High
Cells in tubules:	High

Antibody staining	Antibody HPA018248	Antibody HPA019127	Antibody CAB009196
Cells in glomeruli	High	High	Medium
Cells in tubules	High	High	Medium

KIDNEY - HPA RNA-seq

Average TPM	17.3

Female, age 58

Sample 1
TPM: 25.4

Cell types%

Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15

Female, age 67

Sample 2
TPM: 19.8

Cell types%

Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5

Female, age 55

Sample 3
TPM: 24.1

Cell types%

Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5

Male, age 46

Sample 4
TPM: 20.3

Cell types%

Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10

Female, age 57

Sample 5
TPM: 6.4

Cell types%

Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20

Male, age 78

Sample 6
TPM: 14.5

Cell types%

Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20

Male, age 73

Sample 7
TPM: 17.9

Cell types%

Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20

Female, age 59

Sample 8
TPM: 18.8

Cell types%

Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15

Female, age 48

Sample 9
TPM: 8.5

Cell types%

Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM	23.6

GTEx sample id

Sample description

RPKM

Kidney - Cortex
RPKM: 23.6

Samples: 32

Max RPKM: 35.3
Min RPKM: 8.7
Std RPKM: 6.5
Median RPKM: 23.5

GTEX-1399S-0526-SM-5IJG8

30-39 years, female

35.3

GTEX-12696-0926-SM-5FQTV

60-69 years, male

34.8

GTEX-ZVZP-0926-SM-5GIDB

50-59 years, male

32.9

GTEX-QLQW-1626-SM-4R1K1

30-39 years, male

32.1

GTEX-ZYT6-2226-SM-5GIC9

30-39 years, male

31.8

GTEX-ZLFU-0926-SM-5P9F8

40-49 years, male

31.6

GTEX-ZYFG-1626-SM-5GZYY

60-69 years, female

31.2

GTEX-145MN-0326-SM-5QGQI

30-39 years, male

28.3

GTEX-UPIC-1126-SM-4IHLO

20-29 years, female

27.4

GTEX-147F4-2626-SM-5Q5CS

50-59 years, male

26.4

Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million	52.2

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 52.2

FF:10017-101C8

60,62,63 years, female

52.2