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GGT1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:19.4TPM
GTEx:4.8RPKM
FANTOM5:6.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not available
Glandular cells:Low
Peripheral nerve/ganglion:Not available
 
 
 

Antibody staining

Antibody HPA045635

  

Antibody HPA047534

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected   Low  

Peripheral nerve/ganglion

 Not detected  
      
      
   
   

COLON - HPA RNA-seq

Average TPM

19.4
overview Male, age 54 Sample 1
TPM: 32.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 10.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 36.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 16.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 19.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 5.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 10.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 31
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 62.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.8
Samples: 149

Max RPKM: 4.6
Min RPKM: 0.6
Std RPKM: 0.7
Median RPKM: 1.7
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 4.6
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 3.9
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 3.9
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 3.5
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 3.5
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 3.4
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 3.4
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 3.2
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 3.2
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 3.2
Show all
Colon - Transverse
RPKM: 7.0
Samples: 196

Max RPKM: 33.3
Min RPKM: 0.6
Std RPKM: 6.2
Median RPKM: 4.4
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 33.3
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 31.6
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 30.9
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 27.5
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 24.6
GTEX-R55G-1226-SM-48FDC 40-49 years, female 21.4
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 20.8
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 20.0
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 19.8
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 18.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

6.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 6.4
FF:10014-101C5 62,83,84 years, mixed 6.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.