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XBP1

COLON - Expression summary

RNA expression
HPA:204.7TPM
GTEx:60.1RPKM
FANTOM5:244.7Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

204.7
overview Male, age 54 Sample 1
TPM: 362.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 170.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 195
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 91.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 171.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 195.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 182.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 160.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 269.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 290.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 217.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 171.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 182.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

60.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 31.5
Samples: 149

Max RPKM: 96.7
Min RPKM: 10.1
Std RPKM: 15.4
Median RPKM: 27.6
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 96.7
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 89.7
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 85.7
GTEX-XBED-1726-SM-47JYO 60-69 years, male 79.4
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 71.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 69.8
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 60.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 58.5
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 58.1
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 54.4
Show all
Colon - Transverse
RPKM: 81.9
Samples: 196

Max RPKM: 312.2
Min RPKM: 16.9
Std RPKM: 43.6
Median RPKM: 75.8
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 312.2
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 229.4
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 209.8
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 181.0
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 179.6
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 174.8
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 170.0
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 169.7
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 165.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 165.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

244.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 244.7
FF:10014-101C5 62,83,84 years, mixed 244.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.