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COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:84.6TPM
GTEx:69.5RPKM
FANTOM5:62.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
 

Antibody staining

Antibody CAB011232

  

Endothelial cells

 Medium  

Glandular cells

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

84.6
overview Male, age 54 Sample 1
TPM: 184
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 101
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 124.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 122.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 73.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 44.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 36.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 57.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 40.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 91.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 56.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 98
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 69.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

69.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 35.7
Samples: 149

Max RPKM: 74.4
Min RPKM: 15.9
Std RPKM: 11.2
Median RPKM: 35.2
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 74.4
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 69.4
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 69.0
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 59.6
GTEX-V955-1726-SM-4JBHF 60-69 years, male 55.7
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 55.4
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 54.6
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 54.5
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 53.8
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 53.6
Show all
Colon - Transverse
RPKM: 95.2
Samples: 196

Max RPKM: 235.1
Min RPKM: 15.4
Std RPKM: 47.0
Median RPKM: 99.0
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 235.1
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 226.2
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 201.1
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 199.4
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 196.1
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 192.5
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 188.9
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 181.1
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 179.0
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 176.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

62.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 62.2
FF:10014-101C5 62,83,84 years, mixed 62.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.