Fields »
ABOUT
HELP
BLOG
RPL3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1465.4TPM
GTEx:550.7RPKM
FANTOM5:259.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA003365

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 

COLON - HPA RNA-seq

Average TPM

1465.4
overview Male, age 54 Sample 1
TPM: 1524.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1471.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1479.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1368.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1324.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1629.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1567.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1566.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1200.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1769.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1302.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1578.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1267
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

550.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 602.5
Samples: 149

Max RPKM: 1097.0
Min RPKM: 403.5
Std RPKM: 118.3
Median RPKM: 570.1
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 1097.0
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 987.9
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 931.0
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 889.3
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 881.5
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 856.7
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 838.4
GTEX-145LS-2926-SM-5O99G 60-69 years, female 828.8
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 820.6
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 813.6
Show all
Colon - Transverse
RPKM: 511.3
Samples: 196

Max RPKM: 896.7
Min RPKM: 246.7
Std RPKM: 102.5
Median RPKM: 501.3
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 896.7
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 837.9
GTEX-1128S-1626-SM-5H12O 60-69 years, female 804.8
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 787.7
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 740.6
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 739.7
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 738.5
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 733.2
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 722.1
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 682.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

259.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 259.9
FF:10014-101C5 62,83,84 years, mixed 259.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.