Tissue expression of PSMC6 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	49.8	TPM
GTEx:	11.2	RPKM
FANTOM5:	67.4	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	High
Fibroblasts:	Medium
Peripheral nerve:	Medium

Antibody staining	Antibody HPA042823
Adipocytes	High
Fibroblasts	Medium
Peripheral nerve	Medium

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	High
Fibroblasts:	High

Antibody staining	Antibody HPA042823
Adipocytes	High
Fibroblasts	High

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	49.8

Female, age 80

Sample 1
TPM: 44.8

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 43

Female, age 57

Sample 3
TPM: 37.8

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 69.2

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 54.1

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	11.2

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 11.6

Samples: 350

Max RPKM: 17.0
Min RPKM: 8.7
Std RPKM: 1.4
Median RPKM: 11.5

GTEX-ZYFD-0226-SM-5NQ86

50-59 years, male

17.0

GTEX-13PVQ-0226-SM-5SIBG

50-59 years, male

16.6

GTEX-OIZI-0226-SM-2XCEE

40-49 years, male

15.8

GTEX-QDT8-0226-SM-32PL4

30-39 years, female

15.5

GTEX-Y8LW-1926-SM-4WWFZ

50-59 years, female

15.3

GTEX-Y5V6-2526-SM-5IFJV

60-69 years, male

15.1

GTEX-11O72-0226-SM-59869

40-49 years, male

15.0

GTEX-145LS-0226-SM-5O9A5

60-69 years, female

15.0

GTEX-11WQC-2426-SM-5EQKQ

60-69 years, male

14.9

GTEX-WFJO-1926-SM-3GILA

30-39 years, male

14.8

Show all

Adipose - Visceral (Omentum)
RPKM: 10.6

Samples: 227

Max RPKM: 16.1
Min RPKM: 7.0
Std RPKM: 1.5
Median RPKM: 10.6

GTEX-13JUV-0626-SM-5J1MQ

40-49 years, female

16.1

GTEX-13PVQ-2226-SM-5L3G9

50-59 years, male

16.1

GTEX-11GS4-1026-SM-5N9DE

60-69 years, male

15.4

GTEX-ZYVF-1026-SM-5E44V

50-59 years, female

15.3

GTEX-ZE7O-1526-SM-5J1NH

50-59 years, female

14.5

GTEX-1128S-0926-SM-5GZZU

60-69 years, female

14.4

GTEX-11WQK-1526-SM-5EGKN

50-59 years, male

14.1

GTEX-1399T-1326-SM-5PNVH

60-69 years, male

13.8

GTEX-WFJO-1026-SM-3GIKL

30-39 years, male

13.8

GTEX-13VXU-1026-SM-5KLZE

50-59 years, male

13.6

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	67.4

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 67.4

FF:10010-101C1

65,65,76 years, mixed

67.4